RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 LHX1P48742 406 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 PGFP49763 221 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 MAPK10P53779 464 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 LTBQ06643 244 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 MAPK7Q13164 816 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 SFRP5Q5T4F7 317 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 ATP1A1-AS1Q5TC04 95 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 CDKAL1Q5VV42 579 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 GALNT17Q6IS24 598 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 SND1Q7KZF4 910 aaKnown RBP eCLIP3.38□□□□□ -1.87
PMS1-215ENST00000447232 ADIPOR2Q86V24 386 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 OR14C36Q8NHC7 312 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 KCNN1Q92952 543 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 FBXO32Q969P5 355 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 PCED1BQ96HM7 432 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 FAM84AQ96KN4 292 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 ZNF560Q96MR9 790 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 NAP1L4Q99733 375 aaKnown RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 CMKLR1Q99788 373 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 MIPEPQ99797 713 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 OMDQ99983 421 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 SYT15Q9BQS2 421 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 MTG2Q9H4K7 406 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 ASB7Q9H672 318 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 CARS2Q9HA77 564 aaKnown RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 KMT5AQ9NQR1 393 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 GDAP2Q9NXN4 497 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 DPP3Q9NY33 737 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 FAM53CQ9NYF3 392 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 ORC3Q9UBD5 711 aaPredicted RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 SUN2Q9UH99 717 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 LSM7Q9UK45 103 aaKnown RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 TLK1Q9UKI8 766 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 PLA2G4CQ9UP65 541 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 RPH3AQ9Y2J0 694 aaPredicted RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 KLF2Q9Y5W3 355 aaPredicted RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 TBC1D3DA0A087WVF3 549 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 TBC1D3IA0A087WXS9 549 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 TBC1D3EA0A087X179 549 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 TBC1D3KA0A087X1G2 549 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 TBC1D3FA6NER0 549 aaPredicted RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 TBC1D3LB9A6J9 549 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 OGTO15294 1046 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 SGSM2O43147 1006 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 TLR5O60602 858 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 PPP6R2O75170 966 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 RTN3O95197 1032 aaPredicted RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 TBX18O95935 607 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 KLKB1P03952 638 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 DLDP09622 509 aaKnown RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 TBC1D3HP0C7X1 549 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 LMO2P25791 158 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 MAT2AP31153 395 aaKnown RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 SLC8A1P32418 973 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 DRD3P35462 400 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 PNPLA4P41247 253 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 PSMC1P62191 440 aaKnown RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 ETF1P62495 437 aaKnown RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 CCL7P80098 99 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 ARID5AQ03989 594 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 ADAM9Q13443 819 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 ART3Q13508 389 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 MAPRE1Q15691 268 aaKnown RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 SKOR2Q2VWA4 1001 aaPredicted RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 DEFB133Q30KQ1 61 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 ZNF542PQ5EBM4 170 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 WIPI1Q5MNZ9 446 aaPredicted RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 TBC1D3GQ6DHY5 549 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 TBC1D3CQ6IPX1 549 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 LETMD1Q6P1Q0 360 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 PIK3AP1Q6ZUJ8 805 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 TGIF2LYQ8IUE0 185 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 HID1Q8IV36 788 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 SLITRK4Q8IW52 837 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 TBC1D3Q8IZP1 549 aaPredicted RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 CACNA2D3Q8IZS8 1091 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 FAM177A1Q8N128 213 aaPredicted RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 AHI1Q8N157 1196 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 NUP93Q8N1F7 819 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 MFSD4AQ8N468 514 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.38□□□□□ -1.87
PMS1-215ENST00000447232 TMEM161BQ8NDZ6 487 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 CXorf38Q8TB03 319 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 KBTBD7Q8WVZ9 684 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 PPP1R13BQ96KQ4 1090 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 TCEANC2Q96MN5 208 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 FRMD6Q96NE9 622 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 RANBP9Q96S59 729 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 LNPKQ9C0E8 428 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 SYNDIG1Q9H7V2 258 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 MLXIPLQ9NP71 852 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.38□□□□□ -1.87
PMS1-215ENST00000447232 CDH9Q9ULB4 789 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 PADI4Q9UM07 663 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 CAPN6Q9Y6Q1 641 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 FLNAP21333 2647 aaKnown RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 PRRC2AP48634 2157 aaKnown RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 MXRA5Q9NR99 2828 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 A0A0B4J269 797 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms