RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 TM4SF1P30408 202 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 LRPAP1P30533 357 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 ACADVLP49748 655 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 MRPS15P82914 257 aaKnown RBP7.62□□□□□ -1.19
HDAC9-214ENST00000441542 MERTKQ12866 999 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 SPCS2Q15005 226 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 SLC27A3Q5K4L6 730 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 LRRC38Q5VT99 294 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 RSBN1Q5VWQ0 802 aaPredicted RBP7.62□□□□□ -1.19
HDAC9-214ENST00000441542 SWSAP1Q6NVH7 229 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 RSBN1LQ6PCB5 846 aaPredicted RBP7.62□□□□□ -1.19
HDAC9-214ENST00000441542 PRR23CQ6ZRP0 262 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 SLCO6A1Q86UG4 719 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 LGI2Q8N0V4 545 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 PLD5Q8N7P1 536 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.62□□□□□ -1.19
HDAC9-214ENST00000441542 ABHD11Q8NFV4 315 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 CALML6Q8TD86 181 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 DLG3Q92796 817 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 GLMNQ92990 594 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 LRCH3Q96II8 777 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 ZFYVE19Q96K21 471 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 TSNARE1Q96NA8 513 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 LGMNQ99538 433 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 UBP1Q9NZI7 540 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 PKD2L2Q9NZM6 624 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 IFT80Q9P2H3 777 aaPredicted RBP7.62□□□□□ -1.19
HDAC9-214ENST00000441542 TBC1D14Q9P2M4 693 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 PCDHGC3Q9UN70 934 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 PRELID1Q9Y255 219 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 TIMM22Q9Y584 194 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 PCDHA11Q9Y5I1 949 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 MYO18AQ92614 2054 aaKnown RBP7.62□□□□□ -1.19
HDAC9-214ENST00000441542 NUP98P52948 1817 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 RSL1D1O76021 490 aaKnown RBP7.62□□□□□ -1.19
HDAC9-214ENST00000441542 CLPXO76031 633 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 TRUB2O95900 331 aaKnown RBP7.62□□□□□ -1.19
HDAC9-214ENST00000441542 RPL14P50914 215 aaKnown RBP7.62□□□□□ -1.19
HDAC9-214ENST00000441542 TNK2Q07912 1038 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 SELENBP1Q13228 472 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 CLPPQ16740 277 aaPredicted RBP7.62□□□□□ -1.19
HDAC9-214ENST00000441542 KIF19Q2TAC6 998 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 IQSEC1Q6DN90 963 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 DCLRE1AQ6PJP8 1040 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 DHRS4L2Q6PKH6 230 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 USP43Q70EL4 1123 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 AMIGO3Q86WK7 504 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 DHRSXQ8N5I4 330 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 PCYOX1LQ8NBM8 494 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 HM13Q8TCT9 377 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 KCTD4Q8WVF5 259 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 PPP1R16BQ96T49 567 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 TCF12Q99081 682 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 C1orf50Q9BV19 199 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 SDCBP2Q9H190 292 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 RSAD1Q9HA92 442 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 NMRAL1Q9HBL8 299 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 FBRSL1Q9HCM7 1045 aaKnown RBP7.62□□□□□ -1.19
HDAC9-214ENST00000441542 CNGB3Q9NQW8 809 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 KCND2Q9NZV8 630 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 COL20A1Q9P218 1284 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 EVLQ9UI08 416 aaPredicted RBP7.62□□□□□ -1.19
HDAC9-214ENST00000441542 PADI4Q9UM07 663 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 PCDHGA7Q9Y5G6 932 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 MAGED1Q9Y5V3 778 aaPredicted RBP7.62□□□□□ -1.19
HDAC9-214ENST00000441542 KIAA1551Q9HCM1 1747 aa7.62□□□□□ -1.19
HDAC9-214ENST00000441542 TCAF2A6NFQ2 919 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 KPNA7A9QM74 516 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 NR5A2O00482 541 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 TRDMT1O14717 391 aaKnown RBP7.61□□□□□ -1.19
HDAC9-214ENST00000441542 PRKCGP05129 697 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 C2P06681 752 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 POLR2BP30876 1174 aaKnown RBP7.61□□□□□ -1.19
HDAC9-214ENST00000441542 GARSP41250 739 aaKnown RBP7.61□□□□□ -1.19
HDAC9-214ENST00000441542 TSPAN7P41732 249 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 IFITM3Q01628 133 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 DGKZQ13574 1117 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 DPYSQ14117 519 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 TFDP2Q14188 446 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 FASTKQ14296 549 aaKnown RBP7.61□□□□□ -1.19
HDAC9-214ENST00000441542 NHSL2Q5HYW2 709 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 SLC10A5Q5PT55 438 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 CRTC3Q6UUV7 619 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 KDELC2Q7Z4H8 507 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 C12orf56Q8IXR9 622 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 SHCBP1Q8NEM2 672 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 ZFPM2Q8WW38 1151 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 SNX19Q92543 992 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 TFAP2CQ92754 450 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 CERS2Q96G23 380 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 EHMT1Q9H9B1 1298 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 GIMAP4Q9NUV9 329 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.61□□□□□ -1.19
HDAC9-214ENST00000441542 TLK1Q9UKI8 766 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 ERVK-11Q9UQG0 969 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 MAST2Q6P0Q8 1798 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 DLEC1Q9Y238 1755 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 SMCHD1A6NHR9 2005 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 CLDN25C9JDP6 229 aa7.61□□□□□ -1.19
HDAC9-214ENST00000441542 KCNK1O00180 336 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms