RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 ARRDC3Q96B67 414 aa11.69□□□□□ -0.54
IRF1-204ENST00000439555 TBC1D31Q96DN5 1066 aa11.69□□□□□ -0.54
IRF1-204ENST00000439555 VCPIP1Q96JH7 1222 aa11.69□□□□□ -0.54
IRF1-204ENST00000439555 CLMPQ9H6B4 373 aa11.69□□□□□ -0.54
IRF1-204ENST00000439555 DONSONQ9NYP3 566 aa11.69□□□□□ -0.54
IRF1-204ENST00000439555 FTSJ1Q9UET6 329 aa11.69□□□□□ -0.54
IRF1-204ENST00000439555 HPCAL4Q9UM19 191 aa11.69□□□□□ -0.54
IRF1-204ENST00000439555 WASF2Q9Y6W5 498 aa11.69□□□□□ -0.54
IRF1-204ENST00000439555 PLXNA2O75051 1894 aa11.69□□□□□ -0.54
IRF1-204ENST00000439555 ARID1BQ8NFD5 2236 aaPredicted RBP11.68□□□□□ -0.54
IRF1-204ENST00000439555 A0A1W2PQU0 124 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 FAM72CH0Y354 149 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 RAMP2O60895 175 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 LEFTY1O75610 366 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 CD160O95971 181 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 HNRNPA2B1P22626 353 aaKnown RBP11.68□□□□□ -0.54
IRF1-204ENST00000439555 ITGB7P26010 798 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 MAT2AP31153 395 aaKnown RBP11.68□□□□□ -0.54
IRF1-204ENST00000439555 AKT2P31751 481 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 HTR7P34969 479 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 NEK3P51956 506 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 YBEYP58557 167 aaPredicted RBP11.68□□□□□ -0.54
IRF1-204ENST00000439555 RHDQ02161 417 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 TYRO3Q06418 890 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 POM121L1PQ3SYA9 428 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 TMEM259Q4ZIN3 620 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 RAB6CQ53S08 254 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 PPP1R15BQ5SWA1 713 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 PRAMEF14Q5SWL7 426 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 FAM72AQ5TYM5 149 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 ACAD10Q6JQN1 1059 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 FAM72DQ6L9T8 149 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 RWDD4Q6NW29 188 aaKnown RBP11.68□□□□□ -0.54
IRF1-204ENST00000439555 KANSL1Q7Z3B3 1105 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 IRF2BP2Q7Z5L9 587 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 SLFN11Q7Z7L1 901 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 FAM72BQ86X60 149 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 DCP2Q8IU60 420 aaKnown RBP11.68□□□□□ -0.54
IRF1-204ENST00000439555 CASKIN2Q8WXE0 1202 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 RAB7BQ96AH8 199 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 IFT43Q96FT9 208 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 KLHDC7BQ96G42 594 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 CNPY3Q9BT09 278 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 SYT11Q9BT88 431 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 RAB6CQ9H0N0 254 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 TNKS2Q9H2K2 1166 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
IRF1-204ENST00000439555 KLHL11Q9NVR0 708 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 NEU3Q9UQ49 428 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 HS3ST3A1Q9Y663 406 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 AK5Q9Y6K8 562 aa11.68□□□□□ -0.54
IRF1-204ENST00000439555 FAM170AA1A519 330 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 SMTNL1A8MU46 457 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 WASH4PA8MWX3 477 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 EIF3CLB5ME19 914 aaKnown RBP11.67□□□□□ -0.54
IRF1-204ENST00000439555 ENC1O14682 589 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 KDELR3O43731 214 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 POP4O95707 220 aaKnown RBP11.67□□□□□ -0.54
IRF1-204ENST00000439555 LDOC1O95751 146 aaPredicted RBP11.67□□□□□ -0.54
IRF1-204ENST00000439555 GSRP00390 522 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 ADRB3P13945 408 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 DESP17661 470 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 ACTN2P35609 894 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 ACVRL1P37023 503 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 CCNHP51946 323 aaPredicted RBP11.67□□□□□ -0.54
IRF1-204ENST00000439555 SNRPD1P62314 119 aaKnown RBP11.67□□□□□ -0.54
IRF1-204ENST00000439555 RPS21P63220 83 aaKnown RBP11.67□□□□□ -0.54
IRF1-204ENST00000439555 IL9RQ01113 521 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 KCNC4Q03721 635 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 ILKQ13418 452 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 POLD3Q15054 466 aaPredicted RBP11.67□□□□□ -0.54
IRF1-204ENST00000439555 INO80DQ53TQ3 878 aaPredicted RBP11.67□□□□□ -0.54
IRF1-204ENST00000439555 EFHC2Q5JST6 749 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 KIAA1161Q6NSJ0 714 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 DNAJC24Q6P3W2 148 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 ABI3BPQ7Z7G0 1075 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 PHLDB2Q86SQ0 1253 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 GATAD2AQ86YP4 633 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 MCOLN2Q8IZK6 566 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 CCDC185Q8N715 623 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 RTL3Q8N8U3 475 aaKnown RBP11.67□□□□□ -0.54
IRF1-204ENST00000439555 GRIN3AQ8TCU5 1115 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 ASB12Q8WXK4 309 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 TSC1Q92574 1164 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 FEM1CQ96JP0 617 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 EIF3CQ99613 913 aaKnown RBP11.67□□□□□ -0.54
IRF1-204ENST00000439555 OSBPL1AQ9BXW6 950 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 NDFIP2Q9NV92 336 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 HECAQ9UBI9 543 aaPredicted RBP11.67□□□□□ -0.54
IRF1-204ENST00000439555 FADS3Q9Y5Q0 445 aa11.67□□□□□ -0.54
IRF1-204ENST00000439555 A0A1W2PQC6 194 aa11.66□□□□□ -0.54
IRF1-204ENST00000439555 B8ZZF3 427 aa11.66□□□□□ -0.54
IRF1-204ENST00000439555 RNF103O00237 685 aa11.66□□□□□ -0.54
IRF1-204ENST00000439555 SLC31A1O15431 190 aa11.66□□□□□ -0.54
IRF1-204ENST00000439555 ARHGAP6O43182 974 aa11.66□□□□□ -0.54
IRF1-204ENST00000439555 TSPAN6O43657 245 aa11.66□□□□□ -0.54
IRF1-204ENST00000439555 PCDH8O95206 1070 aa11.66□□□□□ -0.54
IRF1-204ENST00000439555 GJB6O95452 261 aa11.66□□□□□ -0.54
IRF1-204ENST00000439555 ATP1A3P13637 1013 aa11.66□□□□□ -0.54
IRF1-204ENST00000439555 EPHB2P29323 1055 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms