RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 CLPTM1LQ96KA5 538 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 TOX2Q96NM4 488 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 DRC3Q9H069 523 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 DPEP3Q9H4B8 488 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 EPB41L1Q9H4G0 881 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 TCF7L2Q9NQB0 619 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 CNGB3Q9NQW8 809 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 OXSMQ9NWU1 459 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 SEPT10Q9P0V9 454 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 CPSF2Q9P2I0 782 aaKnown RBP8.84□□□□□ -0.99
GABPB1-205ENST00000429662 STK39Q9UEW8 545 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 TUBGCP4Q9UGJ1 667 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 PPM1HQ9ULR3 514 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 PSMD13Q9UNM6 376 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 POMPQ9Y244 141 aa8.84□□□□□ -0.99
GABPB1-205ENST00000429662 MCM3APO60318 1980 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 GVINP1Q7Z2Y8 2422 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 SMIM28A0A1B0GU29 152 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 ZCWPW2A0A1B0GU75 182 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 ENO4A6NNW6 628 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 G3V2L1 256 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 MATN2O00339 956 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 PPEF2O14830 753 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 DENRO43583 198 aaKnown RBP8.83□□□□□ -1
GABPB1-205ENST00000429662 CREB3O43889 395 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 GPR32O75388 356 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 RECQL4O94761 1208 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 DDHD2O94830 711 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 C2P06681 752 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 MMP3P08254 477 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 ACRP10323 421 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 PTPN1P18031 435 aaKnown RBP8.83□□□□□ -1
GABPB1-205ENST00000429662 ERCC2P18074 760 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 TUBP50607 506 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 RPL14P50914 215 aaKnown RBP8.83□□□□□ -1
GABPB1-205ENST00000429662 ATXN1P54253 815 aaKnown RBP8.83□□□□□ -1
GABPB1-205ENST00000429662 TPI1P60174 286 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 ADIGQ0VDE8 80 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 GALNT2Q10471 571 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 CDH17Q12864 832 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 SEMA3BQ13214 749 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 SLC12A1Q13621 1099 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 RFTN1Q14699 578 aaPredicted RBP8.83□□□□□ -1
GABPB1-205ENST00000429662 RALGAPA2Q2PPJ7 1873 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 AP1ARQ63HQ0 302 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 SEL1L3Q68CR1 1132 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 KCNMB4Q86W47 210 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 PYROXD2Q8N2H3 581 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 TMEM86AQ8N2M4 240 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 AFAP1L2Q8N4X5 818 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 CNTD1Q8N815 330 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 OR52K1Q8NGK4 314 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 GDPD5Q8WTR4 605 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 IRGQQ8WZA9 623 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 NCSTNQ92542 709 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 LENG1Q96BZ8 264 aaPredicted RBP8.83□□□□□ -1
GABPB1-205ENST00000429662 FAR2Q96K12 515 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 TSGA13Q96PP4 275 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 PPP1R16BQ96T49 567 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 GPR22Q99680 433 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 KIFC1Q9BW19 673 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 RHOJQ9H4E5 214 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 DMAP1Q9NPF5 467 aaPredicted RBP8.83□□□□□ -1
GABPB1-205ENST00000429662 PLK2Q9NYY3 685 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 FBXW11Q9UKB1 542 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 RAB26Q9ULW5 256 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 AAR2Q9Y312 384 aaKnown RBP8.83□□□□□ -1
GABPB1-205ENST00000429662 PSAT1Q9Y617 370 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 COMMD3-BMI1R4GMX3 469 aa8.83□□□□□ -1
GABPB1-205ENST00000429662 CHD6Q8TD26 2715 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 MBLAC1A4D2B0 266 aaPredicted RBP8.82□□□□□ -1
GABPB1-205ENST00000429662 TRPC5OSA6NMA1 111 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 MEI4A8MW99 385 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 CACNG3O60359 315 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 NPHS1O60500 1241 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 TADA2AO75478 443 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 ANXA9O76027 345 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 PABPC4LP0CB38 370 aaKnown RBP8.82□□□□□ -1
GABPB1-205ENST00000429662 FAM200BP0CF97 657 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 ZNF286BP0CG31 522 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 VCLP18206 1134 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 PAX3P23760 479 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 LMO2P25791 158 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 PIK3R1P27986 724 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 LHX1P48742 406 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 CSRP3P50461 194 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 RABGGTBP53611 331 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 EPHB1P54762 984 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 CRADDP78560 199 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 CYLC2Q14093 348 aaPredicted RBP8.82□□□□□ -1
GABPB1-205ENST00000429662 MAPRE2Q15555 327 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 ADRM1Q16186 407 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 AAK1Q2M2I8 961 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 KIZQ2M2Z5 673 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 MMEL1Q495T6 779 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 LIN52Q52LA3 116 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 PPM1JQ5JR12 505 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 RALGPS1Q5JS13 557 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 PCID2Q5JVF3 399 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 RARS2Q5T160 578 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms