RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 RALGDSQ12967 914 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 PRKG1Q13976 671 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 INPP5AQ14642 412 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 TREML2Q5T2D2 321 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 SLC39A4Q6P5W5 647 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 PIWIL3Q7Z3Z3 882 aaKnown RBP16.28■□□□□ 0.2
C9orf3-206ENST00000428313 AGR3Q8TD06 166 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 FUNDC2Q9BWH2 189 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 SNX25Q9H3E2 840 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 APOBEC3GQ9HC16 384 aaKnown RBP16.28■□□□□ 0.2
C9orf3-206ENST00000428313 GMIPQ9P107 970 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 CNTNAP4Q9C0A0 1308 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 GSNP06396 782 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 TFEBP19484 476 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 ITIH1P19827 911 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 M6PRP20645 277 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 IL10P22301 178 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 YAP1P46937 504 aaKnown RBP16.27■□□□□ 0.2
C9orf3-206ENST00000428313 SERPINB10P48595 397 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 GTF2IP78347 998 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 GLRA4Q5JXX5 417 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 TDRD10Q5VZ19 366 aaKnown RBP16.27■□□□□ 0.2
C9orf3-206ENST00000428313 NXNQ6DKJ4 435 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 ZNF280DQ6N043 979 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 LRRC8EQ6NSJ5 796 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 FAM45BPQ6NSW5 357 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 GK5Q6ZS86 529 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 CHST15Q7LFX5 561 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-206ENST00000428313 SNX29P2Q8IUI4 249 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 ESX1Q8N693 406 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 LEMD2Q8NC56 503 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 FAM45AQ8TCE6 357 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 CDK5RAP1Q96SZ6 601 aaKnown RBP16.27■□□□□ 0.2
C9orf3-206ENST00000428313 RIT2Q99578 217 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 CALN1Q9BXU9 219 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 IL22Q9GZX6 179 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 OXSMQ9NWU1 459 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 MTMR10Q9NXD2 777 aa16.27■□□□□ 0.2
C9orf3-206ENST00000428313 TIMM44O43615 452 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 FKBP9O95302 570 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 FYNP06241 537 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 FCGR1AP12314 374 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 EEF1B2P24534 225 aaKnown RBP16.26■□□□□ 0.19
C9orf3-206ENST00000428313 IFNA8P32881 189 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 CSE1LP55060 971 aaKnown RBP16.26■□□□□ 0.19
C9orf3-206ENST00000428313 KIZQ2M2Z5 673 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 FAM182AQ5T1J6 154 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 REP15Q6BDI9 236 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 TNS4Q8IZW8 715 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 OR6Q1Q8NGQ2 317 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 SNX15Q9NRS6 342 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 ZNF358Q9NW07 568 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 SFMBT1Q9UHJ3 866 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 NRAPQ86VF7 1730 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 TOMM70O94826 608 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 VNN1O95497 513 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 CHRNGP07510 517 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 ATP6V1B2P21281 511 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 EPHX2P34913 555 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 GPD2P43304 727 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 RBM48Q5RL73 367 aaKnown RBP16.26■□□□□ 0.19
C9orf3-206ENST00000428313 KIAA1841Q6NSI8 718 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 C8orf82Q6P1X6 216 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-206ENST00000428313 DHRS9Q9BPW9 319 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 MTMR12Q9C0I1 747 aa16.26■□□□□ 0.19
C9orf3-206ENST00000428313 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.26■□□□□ 0.19
C9orf3-206ENST00000428313 DHRS12A0PJE2 317 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 TAF4O00268 1085 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 SRP72O76094 671 aaKnown RBP16.25■□□□□ 0.19
C9orf3-206ENST00000428313 LYPLA2O95372 231 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 TRUB2O95900 331 aaKnown RBP16.25■□□□□ 0.19
C9orf3-206ENST00000428313 CD40LGP29965 261 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 TM4SF1P30408 202 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 RPS9P46781 194 aaKnown RBP16.25■□□□□ 0.19
C9orf3-206ENST00000428313 CLCQ05315 142 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 STILQ15468 1287 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 SKIV2LQ15477 1246 aaKnown RBP16.25■□□□□ 0.19
C9orf3-206ENST00000428313 CTF1Q16619 201 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 DGUOKQ16854 277 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.25■□□□□ 0.19
C9orf3-206ENST00000428313 ILDR2Q71H61 639 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 CLEC14AQ86T13 490 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 KIAA0319LQ8IZA0 1049 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 SLC4A11Q8NBS3 891 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 SIMC1Q8NDZ2 872 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 SHCBP1Q8NEM2 672 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 RDH11Q8TC12 318 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 MARK4Q96L34 752 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 PPP1R36Q96LQ0 422 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 CEP295NLQ96MC4 621 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 IL12RB2Q99665 862 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 CLPBQ9H078 707 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 SLC17A6Q9P2U8 582 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 OAZ3Q9UMX2 235 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 MN1Q10571 1320 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-206ENST00000428313 COL16A1Q07092 1604 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-206ENST00000428313 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-206ENST00000428313 PIGNO95427 931 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 MPOP05164 745 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 KRT8P05787 483 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms