RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 FAM72CH0Y354 149 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 CSO75390 466 aaKnown RBP15.25■□□□□ 0.03
ATG4B-209ENST00000425239 PLA2G2AP14555 144 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 GKP32189 559 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 ACVRL1P37023 503 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 ABL2P42684 1182 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 BPIFB4P59827 614 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 CXADRP78310 365 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 GNA12Q03113 381 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 MAN2A1Q16706 1144 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 FAM102AQ5T9C2 384 aaPredicted RBP15.25■□□□□ 0.03
ATG4B-209ENST00000425239 FAM72AQ5TYM5 149 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 KLHDC7AQ5VTJ3 777 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 FAM72DQ6L9T8 149 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 RETSATQ6NUM9 610 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 NOP9Q86U38 636 aaKnown RBP15.25■□□□□ 0.03
ATG4B-209ENST00000425239 FAM72BQ86X60 149 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 FAM131BQ86XD5 332 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 LSMEM2Q8N112 164 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 PPP1R16AQ96I34 528 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 DEPDC7Q96QD5 511 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 SPON2Q9BUD6 331 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 OSBPL2Q9H1P3 480 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 NDST4Q9H3R1 872 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 POLR1BQ9H9Y6 1135 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 ATP13A1Q9HD20 1204 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 HECAQ9UBI9 543 aaPredicted RBP15.25■□□□□ 0.03
ATG4B-209ENST00000425239 FHOD1Q9Y613 1164 aa15.25■□□□□ 0.03
ATG4B-209ENST00000425239 FAM170AA1A519 330 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 C16orf96A6NNT2 1141 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 AREL1O15033 823 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 GCATO75600 419 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 ALPPL2P10696 532 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 RABIFP47224 123 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 PCBP4P57723 403 aaKnown RBP15.24■□□□□ 0.03
ATG4B-209ENST00000425239 NOMO3P69849 1222 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 GABREP78334 506 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 NRG1Q02297 640 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-209ENST00000425239 MAPK8IP2Q13387 824 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-209ENST00000425239 KIF26BQ2KJY2 2108 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 VWA3BQ502W6 1294 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 ZCCHC8Q6NZY4 707 aaKnown RBP15.24■□□□□ 0.03
ATG4B-209ENST00000425239 GUSBP11Q6P575 273 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 PTAR1Q7Z6K3 402 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-209ENST00000425239 PARGQ86W56 976 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 MLKLQ8NB16 471 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 IFI44Q8TCB0 444 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 ARHGEF2Q92974 986 aaKnown RBP15.24■□□□□ 0.03
ATG4B-209ENST00000425239 WBP1Q96G27 269 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 NAF1Q96HR8 494 aaKnown RBP15.24■□□□□ 0.03
ATG4B-209ENST00000425239 SLC46A1Q96NT5 459 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 BOCQ9BWV1 1114 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 TCEAL2Q9H3H9 227 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-209ENST00000425239 CPNE5Q9HCH3 593 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 SALL4Q9UJQ4 1053 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 PAXBP1Q9Y5B6 917 aa15.24■□□□□ 0.03
ATG4B-209ENST00000425239 PMS2P1A4D2B8 440 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 TPP1O14773 563 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 AQP9O43315 295 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 TSPAN6O43657 245 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 ADRA1BP35368 520 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 RECQLP46063 649 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-209ENST00000425239 MTIF2P46199 727 aaKnown RBP15.23■□□□□ 0.03
ATG4B-209ENST00000425239 DUSP3P51452 185 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-209ENST00000425239 PDE1CQ14123 709 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-209ENST00000425239 HS1BP3Q53T59 392 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 ZSCAN30Q86W11 494 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 DRC7Q8IY82 874 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 EMC1Q8N766 993 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 CPA5Q8WXQ8 436 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 TTC9Q92623 222 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 CENPIQ92674 756 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-209ENST00000425239 LGMNQ99538 433 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 SEMA4CQ9C0C4 833 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 OR12D3Q9UGF7 316 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 ITM2BQ9Y287 266 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 ENTPD2Q9Y5L3 495 aa15.23■□□□□ 0.03
ATG4B-209ENST00000425239 ERVH48-1M5A8F1 160 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 FPGTO14772 594 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 LSM8O95777 96 aaKnown RBP15.22■□□□□ 0.03
ATG4B-209ENST00000425239 CYP1A1P04798 512 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-209ENST00000425239 MMEP08473 750 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 UCHL3P15374 230 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 JUNDP17535 347 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 CHRNB2P17787 502 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 DNA2P51530 1060 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 PDX1P52945 283 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 CFHR1Q03591 330 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 BECN1Q14457 450 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 CDKN3Q16667 212 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 DEFB133Q30KQ1 61 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 CCDC14Q49A88 953 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 ZNF805Q5CZA5 627 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 PERM1Q5SV97 790 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 TAF3Q5VWG9 929 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 MAPK15Q8TD08 544 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 EPS8L1Q8TE68 723 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 RAB7BQ96AH8 199 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 ATXN7L3BQ96GX2 97 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 TUBGCP2Q9BSJ2 902 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms