RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 FUCA2Q9BTY2 467 aa25.4■■□□□ 1.66
HLA-C-204ENST00000415537 FZD3Q9NPG1 666 aa25.4■■□□□ 1.66
HLA-C-204ENST00000415537 DONSONQ9NYP3 566 aa25.4■■□□□ 1.66
HLA-C-204ENST00000415537 SPEGQ15772 3267 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 FGF10O15520 208 aaPredicted RBP25.39■■□□□ 1.66
HLA-C-204ENST00000415537 ATMINO43313 823 aaPredicted RBP25.39■■□□□ 1.66
HLA-C-204ENST00000415537 DKK1O94907 266 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 GZMAP12544 262 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 GKP32189 559 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 TPI1P60174 286 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 OGDHQ02218 1023 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 RAD51Q06609 339 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 NR1I3Q14994 352 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 ZNF805Q5CZA5 627 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 SEL1L3Q68CR1 1132 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 PLEKHA7Q6IQ23 1121 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 CCNI2Q6ZMN8 369 aaPredicted RBP25.39■■□□□ 1.66
HLA-C-204ENST00000415537 PARS2Q7L3T8 475 aaKnown RBP25.39■■□□□ 1.66
HLA-C-204ENST00000415537 TMPRSS7Q7RTY8 843 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 ZNF571Q7Z3V5 609 aaPredicted RBP25.39■■□□□ 1.66
HLA-C-204ENST00000415537 CASKIN2Q8WXE0 1202 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 OSBPL1AQ9BXW6 950 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 EDEM3Q9BZQ6 932 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 FADS3Q9Y5Q0 445 aa25.39■■□□□ 1.66
HLA-C-204ENST00000415537 USP24Q9UPU5 2620 aa25.39■■□□□ 1.65
HLA-C-204ENST00000415537 SYCE3A1L190 88 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 C16orf96A6NNT2 1141 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 WASH4PA8MWX3 477 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 RASA4BC9J798 803 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 NEMP1O14524 444 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 ENC1O14682 589 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 RASA4O43374 803 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 AP1G1O43747 822 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 RNF8O76064 485 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 FTLP02792 175 aaPredicted RBP25.38■■□□□ 1.65
HLA-C-204ENST00000415537 HTR7P34969 479 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 PRKCIP41743 596 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 MYLK3Q32MK0 819 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 PARP15Q460N3 678 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 FAM174AQ8TBP5 190 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 RAB7BQ96AH8 199 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 CALN1Q9BXU9 219 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 SLC17A9Q9BYT1 436 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 NOL6Q9H6R4 1146 aaKnown RBP25.38■■□□□ 1.65
HLA-C-204ENST00000415537 AP4E1Q9UPM8 1137 aa25.38■■□□□ 1.65
HLA-C-204ENST00000415537 AKAP13Q12802 2813 aa25.37■■□□□ 1.65
HLA-C-204ENST00000415537 TMCC1O94876 653 aa25.37■■□□□ 1.65
HLA-C-204ENST00000415537 UGT2B4P06133 528 aa25.37■■□□□ 1.65
HLA-C-204ENST00000415537 KLHL40Q2TBA0 621 aa25.37■■□□□ 1.65
HLA-C-204ENST00000415537 TMEM259Q4ZIN3 620 aa25.37■■□□□ 1.65
HLA-C-204ENST00000415537 INO80DQ53TQ3 878 aaPredicted RBP25.37■■□□□ 1.65
HLA-C-204ENST00000415537 ERMARDQ5T6L9 678 aa25.37■■□□□ 1.65
HLA-C-204ENST00000415537 ZSCAN30Q86W11 494 aa25.37■■□□□ 1.65
HLA-C-204ENST00000415537 UMODL1-AS1Q8N2C9 162 aa25.37■■□□□ 1.65
HLA-C-204ENST00000415537 HMCESQ96FZ2 354 aa25.37■■□□□ 1.65
HLA-C-204ENST00000415537 GDAP1L1Q96MZ0 367 aa25.37■■□□□ 1.65
HLA-C-204ENST00000415537 CNOT8Q9UFF9 292 aaKnown RBP25.37■■□□□ 1.65
HLA-C-204ENST00000415537 ASPMQ8IZT6 3477 aa25.37■■□□□ 1.65
HLA-C-204ENST00000415537 TDRD6O60522 2096 aaKnown RBP25.36■■□□□ 1.65
HLA-C-204ENST00000415537 TSPAN6O43657 245 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 IGSF6O95976 241 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 PAK4O96013 591 aaPredicted RBP25.36■■□□□ 1.65
HLA-C-204ENST00000415537 CLDN2P57739 230 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 RHOAP61586 193 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 SGCGQ13326 291 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 SERINC3Q13530 473 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 ATXN7L2Q5T6C5 722 aaPredicted RBP25.36■■□□□ 1.65
HLA-C-204ENST00000415537 DNAAF5Q86Y56 855 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 ARHGEF26Q96DR7 871 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 TRIM11Q96F44 468 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 KLHL32Q96NJ5 620 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 TTYH3Q9C0H2 523 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 DHX35Q9H5Z1 703 aaKnown RBP25.36■■□□□ 1.65
HLA-C-204ENST00000415537 GPATCH2LQ9NWQ4 482 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 PCSK1NQ9UHG2 260 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 HS3ST3A1Q9Y663 406 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 SCINQ9Y6U3 715 aa25.36■■□□□ 1.65
HLA-C-204ENST00000415537 TMEM191CA6NGB0 347 aa25.35■■□□□ 1.65
HLA-C-204ENST00000415537 A6NNZ2 444 aa25.35■■□□□ 1.65
HLA-C-204ENST00000415537 EIF3CLB5ME19 914 aaKnown RBP25.35■■□□□ 1.65
HLA-C-204ENST00000415537 EEF2KO00418 725 aaKnown RBP25.35■■□□□ 1.65
HLA-C-204ENST00000415537 DDX3XO00571 662 aaKnown RBP eCLIP25.35■■□□□ 1.653e-9■■□□□ 12.3
HLA-C-204ENST00000415537 DAPK3O43293 454 aa25.35■■□□□ 1.65
HLA-C-204ENST00000415537 SKILP12757 684 aa25.35■■□□□ 1.65
HLA-C-204ENST00000415537 FIGNQ5HY92 759 aa25.35■■□□□ 1.65
HLA-C-204ENST00000415537 E4F1Q66K89 784 aaPredicted RBP25.35■■□□□ 1.65
HLA-C-204ENST00000415537 DHRS13Q6UX07 377 aa25.35■■□□□ 1.65
HLA-C-204ENST00000415537 GDPD4Q6W3E5 623 aa25.35■■□□□ 1.65
HLA-C-204ENST00000415537 LUZP1Q86V48 1076 aa25.35■■□□□ 1.65
HLA-C-204ENST00000415537 OR13H1Q8NG92 308 aa25.35■■□□□ 1.65
HLA-C-204ENST00000415537 ZNF653Q96CK0 615 aa25.35■■□□□ 1.65
HLA-C-204ENST00000415537 EIF3CQ99613 913 aaKnown RBP25.35■■□□□ 1.65
HLA-C-204ENST00000415537 KLC2Q9H0B6 622 aa25.35■■□□□ 1.65
HLA-C-204ENST00000415537 CBX8Q9HC52 389 aa25.35■■□□□ 1.65
HLA-C-204ENST00000415537 PCDHGA1Q9Y5H4 931 aa25.35■■□□□ 1.65
HLA-C-204ENST00000415537 PRPSAP2O60256 369 aa25.34■■□□□ 1.65
HLA-C-204ENST00000415537 SDC3O75056 442 aa25.34■■□□□ 1.65
HLA-C-204ENST00000415537 MYBL1P10243 752 aa25.34■■□□□ 1.65
HLA-C-204ENST00000415537 CDK4P11802 303 aa25.34■■□□□ 1.65
HLA-C-204ENST00000415537 FANCCQ00597 558 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms