RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 CCDC14Q49A88 953 aa17.05■□□□□ 0.32
SF1-207ENST00000413951 LRRC69Q6ZNQ3 347 aa17.05■□□□□ 0.32
SF1-207ENST00000413951 H2AFVQ71UI9 128 aa17.05■□□□□ 0.32
SF1-207ENST00000413951 DCP2Q8IU60 420 aaKnown RBP17.05■□□□□ 0.32
SF1-207ENST00000413951 FNIP1Q8TF40 1166 aa17.05■□□□□ 0.32
SF1-207ENST00000413951 RXFP2Q8WXD0 754 aa17.05■□□□□ 0.32
SF1-207ENST00000413951 CENPIQ92674 756 aaPredicted RBP17.05■□□□□ 0.32
SF1-207ENST00000413951 MCEEQ96PE7 176 aa17.05■□□□□ 0.32
SF1-207ENST00000413951 PACSIN1Q9BY11 444 aa17.05■□□□□ 0.32
SF1-207ENST00000413951 CEP44Q9C0F1 390 aa17.05■□□□□ 0.32
SF1-207ENST00000413951 MRPL47Q9HD33 250 aaKnown RBP17.05■□□□□ 0.32
SF1-207ENST00000413951 VPS51Q9UID3 782 aa17.05■□□□□ 0.32
SF1-207ENST00000413951 EPN1Q9Y6I3 576 aaPredicted RBP17.05■□□□□ 0.32
SF1-207ENST00000413951 PTPRBP23467 1997 aa17.05■□□□□ 0.32
SF1-207ENST00000413951 PLXNB3Q9ULL4 1909 aa17.05■□□□□ 0.32
SF1-207ENST00000413951 ANKRD11Q6UB99 2663 aaPredicted RBP17.04■□□□□ 0.32
SF1-207ENST00000413951 TMEM131Q92545 1883 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 ILVBLA1L0T0 632 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 EIF4E1BA6NMX2 242 aaKnown RBP17.04■□□□□ 0.32
SF1-207ENST00000413951 RIOK3O14730 519 aaKnown RBP17.04■□□□□ 0.32
SF1-207ENST00000413951 ALPPL2P10696 532 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 HNRNPA2B1P22626 353 aaKnown RBP17.04■□□□□ 0.32
SF1-207ENST00000413951 ACP1P24666 158 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 SDC4P31431 198 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 ZNF143P52747 638 aaPredicted RBP17.04■□□□□ 0.32
SF1-207ENST00000413951 OGDHQ02218 1023 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 BNIP3Q12983 259 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 DNAJC3Q13217 504 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 ZNF211Q13398 564 aaPredicted RBP17.04■□□□□ 0.32
SF1-207ENST00000413951 TCEAL1Q15170 157 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 C14orf80Q86SX3 495 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 HORMAD1Q86X24 394 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 SPATS2Q86XZ4 545 aaKnown RBP17.04■□□□□ 0.32
SF1-207ENST00000413951 OR2A12Q8NGT7 310 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 ARHGEF26Q96DR7 871 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 IFT43Q96FT9 208 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 CFAP57Q96MR6 1250 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 TBCBQ99426 244 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 HDAC8Q9BY41 377 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 KLHL11Q9NVR0 708 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 IL36AQ9UHA7 158 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 AK5Q9Y6K8 562 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 FREM2Q5SZK8 3169 aa17.04■□□□□ 0.32
SF1-207ENST00000413951 PLXNA2O75051 1894 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 IGLV3-10A0A075B6K4 115 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 A0A1W2PQU0 124 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 NEMP2A6NFY4 417 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 PLK4O00444 970 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 RRP8O43159 456 aaKnown RBP17.03■□□□□ 0.32
SF1-207ENST00000413951 CNTN5O94779 1100 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 THEGLP0DJG4 465 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 GPD1P21695 349 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 NUMBP49757 651 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 GEMIN4P57678 1058 aaKnown RBP17.03■□□□□ 0.32
SF1-207ENST00000413951 ARL13BQ3SXY8 428 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 POM121L1PQ3SYA9 428 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 ALFQ53S48 1182 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 PIP5KL1Q5T9C9 394 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 HES3Q5TGS1 186 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 DCUN1D2Q6PH85 259 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 ERN2Q76MJ5 926 aaKnown RBP17.03■□□□□ 0.32
SF1-207ENST00000413951 STRADAQ7RTN6 431 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 LRRC8AQ8IWT6 810 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 PCDH20Q8N6Y1 951 aaKnown RBP17.03■□□□□ 0.32
SF1-207ENST00000413951 TMEM145Q8NBT3 493 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 CCDC112Q8NEF3 446 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 OR52K2Q8NGK3 314 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 CTNNBL1Q8WYA6 563 aaPredicted RBP17.03■□□□□ 0.32
SF1-207ENST00000413951 RFFLQ8WZ73 363 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 CNPY3Q9BT09 278 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 ZYG11BQ9C0D3 744 aa17.03■□□□□ 0.32
SF1-207ENST00000413951 PPARGC1AQ9UBK2 798 aaKnown RBP17.03■□□□□ 0.32
SF1-207ENST00000413951 REXO2Q9Y3B8 237 aaKnown RBP17.03■□□□□ 0.32
SF1-207ENST00000413951 SLC31A1O15431 190 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 PCDH8O95206 1070 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 MT-CO1P00395 513 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 GGCXP38435 758 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 ABCG1P45844 678 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 IRAK1P51617 712 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 NEK3P51956 506 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 METAP1P53582 386 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 DAB2P98082 770 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 TARDBPQ13148 414 aaKnown RBP eCLIP17.02■□□□□ 0.32
SF1-207ENST00000413951 RTP5Q14D33 572 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 KIAA1161Q6NSJ0 714 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 C22orf39Q6P5X5 142 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 FBXL19Q6PCT2 694 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 KANSL1Q7Z3B3 1105 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 ANP32BQ92688 251 aaKnown RBP17.02■□□□□ 0.32
SF1-207ENST00000413951 LRIG1Q96JA1 1093 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 FEM1CQ96JP0 617 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 PSMB7Q99436 277 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 SPON2Q9BUD6 331 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 DUSP23Q9BVJ7 150 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 NUP85Q9BW27 656 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 TRIM7Q9C029 511 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 USP29Q9HBJ7 922 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 UVRAGQ9P2Y5 699 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 CLCA2Q9UQC9 943 aa17.02■□□□□ 0.32
SF1-207ENST00000413951 HS3ST3A1Q9Y663 406 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms