RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 PCDHB9Q9Y5E1 797 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 USP34Q70CQ2 3546 aa6.5□□□□□ -1.37
USP54-202ENST00000413442 VPS13AQ96RL7 3174 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 EP300Q09472 2414 aaPredicted RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 CACNA1EQ15878 2313 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 PCNX2A6NKB5 2137 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 A0A0A6YYK5 440 aaPredicted RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 FAM221BA6H8Z2 402 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 NEMP2A6NFY4 417 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 GOLGA6L6A8MZA4 724 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 TLR4O00206 839 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 SMAD6O43541 496 aaKnown RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 GDF9O60383 454 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 SNAP91O60641 907 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 MFAP3LO75121 409 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 LEFTY1O75610 366 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 GJB3O75712 270 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 PALMO75781 387 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 FSBPO95073 299 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 KCNK5O95279 499 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 RARAP10276 462 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 ADRB3P13945 408 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 HNRNPA2B1P22626 353 aaKnown RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 CA4P22748 312 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 CCNCP24863 283 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 AKT2P31751 481 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 PSMD8P48556 350 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 STK19P49842 368 aaPredicted RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 PEX5P50542 639 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 CCNHP51946 323 aaPredicted RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 RHOAP61586 193 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 AP1S1P61966 158 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 SHC2P98077 582 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 OGDHQ02218 1023 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 CNTN1Q12860 1018 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 PTK2BQ14289 1009 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 IFI16Q16666 785 aaKnown RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 ODF2Q5BJF6 829 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 PPP6R3Q5H9R7 873 aaPredicted RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 AGBL4Q5VU57 503 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 E4F1Q66K89 784 aaPredicted RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 NCEH1Q6PIU2 408 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 PHLDB2Q86SQ0 1253 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 PIP4P1Q86T03 277 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 TTC7BQ86TV6 843 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 FAM124AQ86V42 546 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 NLRP8Q86W28 1048 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 CACTIN-AS1Q8N1I8 211 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 ARFGAP1Q8N6T3 406 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 ZNF366Q8N895 744 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 KCTD6Q8NC69 237 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 SPDYE1Q8NFV5 336 aaPredicted RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 ATL2Q8NHH9 583 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 ZNF564Q8TBZ8 553 aaPredicted RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 BTN2A2Q8WVV5 523 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 KLHDC7BQ96G42 594 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 TBATAQ96M53 351 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 TSGA13Q96PP4 275 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 SRPK1Q96SB4 655 aaKnown RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 ZNF670Q9BS34 389 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 C1QTNF2Q9BXJ5 285 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 SLC17A9Q9BYT1 436 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 MIR1-1HGQ9H1L0 117 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 SLC6A17Q9H1V8 727 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 SUV39H2Q9H5I1 410 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 GAREM1Q9H706 876 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 ATP13A3Q9H7F0 1226 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 TM9SF3Q9HD45 589 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 GDF3Q9NR23 364 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 TMPRSS4Q9NRS4 437 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 TM7SF3Q9NS93 570 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 NCKIPSDQ9NZQ3 722 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 CWC15Q9P013 229 aaKnown RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 CTTNBP2NLQ9P2B4 639 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 SEPT3Q9UH03 358 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 PCSK1NQ9UHG2 260 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 IPO11Q9UI26 975 aaKnown RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 DNPEPQ9ULA0 475 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 NEU3Q9UQ49 428 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 APOBEC2Q9Y235 224 aaKnown RBP6.49□□□□□ -1.37
USP54-202ENST00000413442 EFR3BQ9Y2G0 817 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.49□□□□□ -1.37
USP54-202ENST00000413442 WASF2Q9Y6W5 498 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 PCDH15Q96QU1 1955 aa6.49□□□□□ -1.37
USP54-202ENST00000413442 A0A1B0GTQ1 180 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 A0A1W2PR77 199 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 TSPAN11A1L157 253 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 FAM47DPA6NHR8 397 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 C16orf96A6NNT2 1141 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 BTNL10A8MVZ5 291 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 PATE3B3GLJ2 98 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 PDE2AO00408 941 aaPredicted RBP6.48□□□□□ -1.37
USP54-202ENST00000413442 KRIT1O00522 736 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 FPGTO14772 594 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 MTSS1O43312 755 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 SOCS5O75159 536 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 PCDH8O95206 1070 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 CD59P13987 128 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 XPAP23025 273 aaPredicted RBP6.48□□□□□ -1.37
USP54-202ENST00000413442 MAOBP27338 520 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms