RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.16□□□□□ -0.141e-53■■□□□ 11.9
APOB-202ENST00000399256 GTF2IRD1Q9UHL9 959 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 TRIM24O15164 1050 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 GAS2O43903 313 aaKnown RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 SLC35E2BP0CK96 405 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 FUT4P22083 530 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 SLC7A1P30825 629 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 CSE1LP55060 971 aaKnown RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 NHSL2Q5HYW2 709 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 PRAMEF18Q5VWM3 479 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 METTL7BQ6UX53 244 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 CENPLQ8N0S6 344 aaPredicted RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 FAM149B1Q96BN6 582 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 UTP6Q9NYH9 597 aaKnown RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 IPO11Q9UI26 975 aaKnown RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 DOLKQ9UPQ8 538 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 ATE1O95260 518 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 PTPN3P26045 913 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 PRKCQQ04759 706 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 LRP8Q14114 963 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 FASTKQ14296 549 aaKnown RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 PPP1R3AQ16821 1122 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 ZBTB46Q86UZ6 589 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 APOBEC3FQ8IUX4 373 aaKnown RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 DEFB106AQ8N104 65 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 NXNL1Q96CM4 212 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 GPR22Q99680 433 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 RNF19AQ9NV58 838 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 ZNF638Q14966 1978 aaKnown RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 A0A087WZ62 844 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 TCRBV3S1A0A5B6 114 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 ZBTB24O43167 697 aaPredicted RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 HSPA1AP0DMV8 641 aaKnown RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 HSPA1BP0DMV9 641 aaKnown RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 UGT1A6P19224 532 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 ZBED5Q49AG3 693 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 C6orf10Q5SRN2 563 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 TSTD2Q5T7W7 516 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 CNSTQ6PJW8 725 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 RPS27LQ71UM5 84 aaKnown RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 ZC3HC1Q86WB0 502 aaKnown RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 ZDHHC17Q8IUH5 632 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 TRPC4APQ8TEL6 797 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 PBXIP1Q96AQ6 731 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 FDXACB1Q9BRP7 624 aaPredicted RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 SPAG4Q9NPE6 437 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 CASS4Q9NQ75 786 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 PFDN4Q9NQP4 134 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 VPS45Q9NRW7 570 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 PAIP2BQ9ULR5 123 aaKnown RBP14.15□□□□□ -0.14
APOB-202ENST00000399256 ANKRD6Q9Y2G4 727 aa14.15□□□□□ -0.14
APOB-202ENST00000399256 A0A087WXM4 84 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 FAM149AA5PLN7 773 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 NEMP2A6NFY4 417 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 GIPC1O14908 333 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 MT-CO1P00395 513 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 SNX16P57768 344 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 TNFAIP2Q03169 654 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 STX5Q13190 355 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 GPR162Q16538 588 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 CATSPERGQ6ZRH7 1159 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 CANT1Q8WVQ1 401 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 TFAP2CQ92754 450 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 THAP11Q96EK4 314 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 GPR20Q99678 358 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 MLPHQ9BV36 600 aaPredicted RBP14.14□□□□□ -0.15
APOB-202ENST00000399256 AS3MTQ9HBK9 375 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 PRMT7Q9NVM4 692 aaPredicted RBP14.14□□□□□ -0.15
APOB-202ENST00000399256 SMOXQ9NWM0 555 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 TLL2Q9Y6L7 1015 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 SSC5DA1L4H1 1573 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 SOWAHBA6NEL2 793 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 TRPC5OSA6NMA1 111 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 GRIA3P42263 894 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 SLC12A1Q13621 1099 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 DCAF6Q58WW2 860 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 XKR5Q6UX68 686 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 PELI3Q8N2H9 469 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 CBR4Q8N4T8 237 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 AFG1LQ8WV93 481 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 MCMBPQ9BTE3 642 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 EFHD1Q9BUP0 239 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 MRPL40Q9NQ50 206 aaKnown RBP14.14□□□□□ -0.15
APOB-202ENST00000399256 INIPQ9NRY2 104 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 TBC1D23Q9NUY8 699 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 SCN4AP35499 1836 aa14.14□□□□□ -0.15
APOB-202ENST00000399256 POLR2AP24928 1970 aaKnown RBP14.13□□□□□ -0.15
APOB-202ENST00000399256 TMEM221A6NGB7 291 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 TARM1B6A8C7 271 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 NRP1O14786 923 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 TPST1O60507 370 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 CLIC3O95833 236 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 PRKAA2P54646 552 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 NME3Q13232 169 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 GPR107Q5VW38 600 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 CEP97Q8IW35 865 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 OR9I1Q8NGQ6 314 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 MAELQ96JY0 434 aaKnown RBP14.13□□□□□ -0.15
APOB-202ENST00000399256 POMKQ9H5K3 350 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 CYP4F12Q9HCS2 524 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms