RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 ECI2O75521 394 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 ACSL3O95573 720 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 CISD3P0C7P0 127 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 ARSAP15289 507 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 GBP2P32456 591 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 CD86P42081 329 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 NUMBP49757 651 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 EIF3BP55884 814 aaKnown RBP19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 WNT3AP56704 352 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 OLIG2Q13516 323 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 RALGPS1Q5JS13 557 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 DENND5AQ6IQ26 1287 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 LINGO4Q6UY18 593 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 ANKMY2Q8IV38 441 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 ATP11CQ8NB49 1132 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 OR52K1Q8NGK4 314 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 SH3GL2Q99962 352 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 TBL1YQ9BQ87 522 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 PLA2G2FQ9BZM2 168 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 HPS4Q9NQG7 708 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 HS3ST2Q9Y278 367 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 SLC27A6Q9Y2P4 619 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 USP15Q9Y4E8 981 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 COL4A2P08572 1712 aa19.75■□□□□ 0.75
PDLIM2-205ENST00000397761 USP12O75317 370 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 PMPCBO75439 489 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 MT-CO1P00395 513 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 RGRP47804 291 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 GPX6P59796 221 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 SULT2A1Q06520 285 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 CDH17Q12864 832 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 MTM1Q13496 603 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 HP1BP3Q5SSJ5 553 aaPredicted RBP19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 EP400NLQ6ZTU2 488 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 ADIPOR2Q86V24 386 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 MICALL1Q8N3F8 863 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 TTC17Q96AE7 1141 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 ZFYVE19Q96K21 471 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 NUDCD1Q96RS6 583 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 EBNA1BP2Q99848 306 aaKnown RBP19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 EBF3Q9H4W6 596 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 ECT2Q9H8V3 914 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 CHMP2BQ9UQN3 213 aa19.74■□□□□ 0.75
PDLIM2-205ENST00000397761 LOC285095A0A1B0GVY8 99 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 OTOL1A6NHN0 477 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 SPAG6O75602 509 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 TCEA3O75764 348 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 EPOP01588 193 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 GSTA2P09210 222 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 PSMC3P17980 439 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 NPY2RP49146 381 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 VASPP50552 380 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 ITKQ08881 620 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 ZNF844Q08AG5 666 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 ARMC3Q5W041 872 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 PARM1Q6UWI2 310 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 AHI1Q8N157 1196 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 MPP5Q8N3R9 675 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 IPMKQ8NFU5 416 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 FGF14Q92915 247 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 PKNOX2Q96KN3 472 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 XPO6Q96QU8 1125 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 NAT9Q9BTE0 207 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 PLAC1Q9HBJ0 212 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 INSIG1O15503 277 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 AGTP01019 485 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 SHBGP04278 402 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 SERPINF2P08697 491 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 CSNK1DP48730 415 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 STEAP4Q687X5 459 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 MTSS1LQ765P7 747 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 CCNJLQ8IV13 435 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 OR2W6PQ8NHA6 318 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 WFIKKN2Q8TEU8 576 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 MYLIPQ8WY64 445 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 ISG20Q96AZ6 181 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 FEM1CQ96JP0 617 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 NSMCE3Q96MG7 304 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 FICDQ9BVA6 458 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 FSD1LQ9BXM9 530 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 NOD2Q9HC29 1040 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 BFARQ9NZS9 450 aa19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 ZC3H7BQ9UGR2 993 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-205ENST00000397761 A0A087WUV0 522 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-205ENST00000397761 TTC24A2A3L6 582 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-205ENST00000397761 ANHXE9PGG2 379 aa19.72■□□□□ 0.75
PDLIM2-205ENST00000397761 SMAD6O43541 496 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-205ENST00000397761 TULP3O75386 442 aa19.72■□□□□ 0.75
PDLIM2-205ENST00000397761 ZNF821O75541 412 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-205ENST00000397761 GJB3O75712 270 aa19.72■□□□□ 0.75
PDLIM2-205ENST00000397761 CPP00450 1065 aa19.72■□□□□ 0.75
PDLIM2-205ENST00000397761 MGAT1P26572 445 aa19.72■□□□□ 0.75
PDLIM2-205ENST00000397761 SSTR1P30872 391 aa19.72■□□□□ 0.75
PDLIM2-205ENST00000397761 DGKGP49619 791 aa19.72■□□□□ 0.75
PDLIM2-205ENST00000397761 SESN2P58004 480 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-205ENST00000397761 TMEM215Q68D42 235 aa19.72■□□□□ 0.75
PDLIM2-205ENST00000397761 C12orf40Q86WS4 652 aa19.72■□□□□ 0.75
PDLIM2-205ENST00000397761 PALM2Q8IXS6 379 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms