RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ZSCAN22P10073 491 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-203ENST00000397378 SLC2A3P11169 496 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 BRD2P25440 801 aaKnown RBP9.62□□□□□ -0.87
NEDD9-203ENST00000397378 CD82P27701 267 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 CCKBRP32239 447 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 CHRNA3P32297 505 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 GPD2P43304 727 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 ACADSBP45954 432 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 NUMBP49757 651 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 FGL2Q14314 439 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 FZD2Q14332 565 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 NAA30Q147X3 362 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-203ENST00000397378 FOXD4L6Q3SYB3 417 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-203ENST00000397378 DCAF17Q5H9S7 520 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-203ENST00000397378 ESRP1Q6NXG1 681 aaKnown RBP9.62□□□□□ -0.87
NEDD9-203ENST00000397378 FOXD4L3Q6VB84 417 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-203ENST00000397378 CIR1Q86X95 450 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-203ENST00000397378 SDR16C5Q8N3Y7 309 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 GALNT11Q8NCW6 608 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 OR52K2Q8NGK3 314 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 RNF34Q969K3 372 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 CCDC114Q96M63 670 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 CPEB1Q9BZB8 566 aaKnown RBP9.62□□□□□ -0.87
NEDD9-203ENST00000397378 POPDC2Q9HBU9 364 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 DYRK4Q9NR20 520 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 PADI4Q9UM07 663 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 PCDHB4Q9Y5E5 795 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 CHD5Q8TDI0 1954 aa9.62□□□□□ -0.87
NEDD9-203ENST00000397378 FAM237AA0A1B0GTK4 181 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 POM121BA6NF01 834 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 WIPF3A6NGB9 483 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 EFCAB7A8K855 629 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 STMND1H3BQB6 276 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 KPNA3O00505 521 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-203ENST00000397378 PMM2O15305 246 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 SLC16A3O15427 465 aaKnown RBP9.61□□□□□ -0.87
NEDD9-203ENST00000397378 BNIP3LO60238 219 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 PCDH8O95206 1070 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 PRNPP04156 253 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 RPLP0P05388 317 aaKnown RBP9.61□□□□□ -0.87
NEDD9-203ENST00000397378 PRKAR1AP10644 381 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 SRCP12931 536 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 LIFP15018 202 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 NR1D1P20393 614 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 SYKP43405 635 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 RABIFP47224 123 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 RPS21P63220 83 aaKnown RBP9.61□□□□□ -0.87
NEDD9-203ENST00000397378 CCL7P80098 99 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 LRMPQ12912 555 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 MTA1Q13330 715 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 C1orf61Q13536 156 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 SEPT6Q14141 434 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 MEA1Q16626 185 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 TMEM164Q5U3C3 297 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 FOXD4L5Q5VV16 416 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-203ENST00000397378 SEL1L3Q68CR1 1132 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 KIAA1161Q6NSJ0 714 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 FBXL22Q6P050 247 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 ERN2Q76MJ5 926 aaKnown RBP9.61□□□□□ -0.87
NEDD9-203ENST00000397378 ZSCAN30Q86W11 494 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 OR2A12Q8NGT7 310 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 STK32AQ8WU08 396 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 FOXD4L4Q8WXT5 416 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-203ENST00000397378 SLC35C1Q96A29 364 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 CCDC74AQ96AQ1 378 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 NT5C1BQ96P26 610 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 CMKLR1Q99788 373 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 SLC4A5Q9BY07 1137 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 HDAC8Q9BY41 377 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 THAP9Q9H5L6 903 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 ST7Q9NRC1 585 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 DKK3Q9UBP4 350 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 GULP1Q9UBP9 304 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 KLF15Q9UIH9 416 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 RABGEF1Q9UJ41 708 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 VPS28Q9UK41 221 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 TP53TG5Q9Y2B4 290 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 TBC1D30Q9Y2I9 924 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 F8P00451 2351 aa9.61□□□□□ -0.87
NEDD9-203ENST00000397378 ZFHX3Q15911 3703 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 ARHGEF17Q96PE2 2063 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 LRP4O75096 1905 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 SDK2Q58EX2 2172 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 TTLL8A6PVC2 850 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 ZNF891A8MT65 544 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 CLDN11O75508 207 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 MT-CO1P00395 513 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 ANXA6P08133 673 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 CCR1P32246 355 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 CLCN6P51797 869 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 ADKP55263 362 aaKnown RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 YWHAZP63104 245 aaKnown RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 PITX1P78337 314 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 KRT83P78385 493 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 FKBP3Q00688 224 aaKnown RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 CENPCQ03188 943 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 DNM1Q05193 864 aaKnown RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 AUHQ13825 339 aaKnown RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 C5orf22Q49AR2 442 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms