RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 IL22Q9GZX6 179 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 PPCSQ9HAB8 311 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 FETUBQ9UGM5 382 aa13.8□□□□□ -0.2
MCF2L-209ENST00000397036 USP15Q9Y4E8 981 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-209ENST00000397036 SHROOM3Q8TF72 1996 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 CDH23Q9H251 3354 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 AGPSO00116 658 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 INSIG1O15503 277 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 TIMM44O43615 452 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 MT-CYBP00156 380 aaPredicted RBP13.79□□□□□ -0.2
MCF2L-209ENST00000397036 EIF2DP41214 584 aaKnown RBP13.79□□□□□ -0.2
MCF2L-209ENST00000397036 ELK3P41970 407 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 DSC2Q02487 901 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 ITKQ08881 620 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 GPS2Q13227 327 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 FRG1Q14331 258 aaKnown RBP13.79□□□□□ -0.2
MCF2L-209ENST00000397036 STAT4Q14765 748 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 FASTKD3Q14CZ7 662 aaKnown RBP13.79□□□□□ -0.2
MCF2L-209ENST00000397036 GAB4Q2WGN9 574 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 ADIPOR2Q86V24 386 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 PALM2Q8IXS6 379 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 AGGF1Q8N302 714 aaeCLIP13.79□□□□□ -0.2
MCF2L-209ENST00000397036 CPA6Q8N4T0 437 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 KDM1BQ8NB78 822 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 FBXO36Q8NEA4 188 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 PTCD2Q8WV60 388 aaKnown RBP13.79□□□□□ -0.2
MCF2L-209ENST00000397036 NXPE3Q969Y0 559 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 FEM1CQ96JP0 617 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 C9orf72Q96LT7 481 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 SH3GL2Q99962 352 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 CCDC77Q9BR77 488 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 HPS4Q9NQG7 708 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 DNAJC17Q9NVM6 304 aaKnown RBP13.79□□□□□ -0.2
MCF2L-209ENST00000397036 LHX3Q9UBR4 397 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 PLAAQ9Y263 795 aa13.79□□□□□ -0.2
MCF2L-209ENST00000397036 A0A087WUV0 522 aaPredicted RBP13.78□□□□□ -0.2
MCF2L-209ENST00000397036 OPA1O60313 960 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 AVILO75366 819 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 MT-CO1P00395 513 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 ASLP04424 464 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 ARSAP15289 507 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 PHBP35232 272 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 CD86P42081 329 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 DGKGP49619 791 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 GPX6P59796 221 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 MAXP61244 160 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 AP1S1P61966 158 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 ECT2LQ008S8 904 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 SMAD4Q13485 552 aaKnown RBP13.78□□□□□ -0.2
MCF2L-209ENST00000397036 RUNX3Q13761 415 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 IHHQ14623 411 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 RASA2Q15283 850 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 FUT11Q495W5 492 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 PREPLQ4J6C6 727 aaPredicted RBP13.78□□□□□ -0.2
MCF2L-209ENST00000397036 SYCP2LQ5T4T6 812 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 STEAP4Q687X5 459 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 TRIM68Q6AZZ1 485 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 ZNF449Q6P9G9 518 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 EP400NLQ6ZTU2 488 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 C3orf62Q6ZUJ4 267 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 YAF2Q8IY57 180 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 CNPY4Q8N129 248 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 OR52K1Q8NGK4 314 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 PLA2G2FQ9BZM2 168 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 EBF3Q9H4W6 596 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 MED4Q9NPJ6 270 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 UBP1Q9NZI7 540 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 TTLL3Q9Y4R7 772 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 ACTL7AQ9Y615 435 aa13.78□□□□□ -0.2
MCF2L-209ENST00000397036 ATP9BO43861 1147 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 TULP3O75386 442 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 PMPCBO75439 489 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 SRPRAP08240 638 aaKnown RBP13.77□□□□□ -0.21
MCF2L-209ENST00000397036 POLR2EP19388 210 aaKnown RBP13.77□□□□□ -0.21
MCF2L-209ENST00000397036 HLA-DPA1P20036 260 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 CDK18Q07002 472 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 SPARCL1Q14515 664 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 EIF4HQ15056 248 aaKnown RBP13.77□□□□□ -0.21
MCF2L-209ENST00000397036 MBLAC2Q68D91 279 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 NCEH1Q6PIU2 408 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 PARM1Q6UWI2 310 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 LINGO4Q6UY18 593 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 LEKR1Q6ZMV7 388 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 TMEM135Q86UB9 458 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 IGDCC3Q8IVU1 814 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 SH2D3CQ8N5H7 860 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 PCDH20Q8N6Y1 951 aaKnown RBP13.77□□□□□ -0.21
MCF2L-209ENST00000397036 DNAAF3Q8N9W5 541 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 IPMKQ8NFU5 416 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 FGF14Q92915 247 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 STAMBPL1Q96FJ0 436 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 LRCH3Q96II8 777 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 RUFY1Q96T51 708 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 TRMT61BQ9BVS5 477 aaKnown RBP13.77□□□□□ -0.21
MCF2L-209ENST00000397036 FSD1LQ9BXM9 530 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 NOD2Q9HC29 1040 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 MRM3Q9HC36 420 aaKnown RBP13.77□□□□□ -0.21
MCF2L-209ENST00000397036 TRPV5Q9NQA5 729 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 DEC1Q9P2X7 70 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms