RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 HAUS2Q9NVX0 235 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 EPS15L1Q9UBC2 864 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 LHX3Q9UBR4 397 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 CD207Q9UJ71 328 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 GGA2Q9UJY4 613 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 HS3ST2Q9Y278 367 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 USP15Q9Y4E8 981 aaPredicted RBP12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 OTOL1A6NHN0 477 aaPredicted RBP12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 ECI2O75521 394 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 NEBLO76041 1014 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 CISD3P0C7P0 127 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 PABPC1P11940 636 aaKnown RBP12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 ARSAP15289 507 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 TSHRP16473 764 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 PSMC3P17980 439 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 GBP2P32456 591 aaPredicted RBP12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 LMAN1P49257 510 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 SKOR1P84550 965 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 SLC20A2Q08357 652 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 NSUN2Q08J23 767 aaKnown RBP eCLIP12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 MTM1Q13496 603 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 SPARCL1Q14515 664 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 KYNUQ16719 465 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 BBS9Q3SYG4 887 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 CFAP58Q5T655 872 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 DENND2CQ68D51 928 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 DENND5AQ6IQ26 1287 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 RETSATQ6NUM9 610 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 GPR153Q6NV75 609 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 LRIG3Q6UXM1 1119 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 LINGO4Q6UY18 593 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 RANBP10Q6VN20 620 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 LINC00523Q86TU6 105 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 METTL3Q86U44 580 aaKnown RBP12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 ADIPOR2Q86V24 386 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 IGDCC3Q8IVU1 814 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 AHI1Q8N157 1196 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 MICALL1Q8N3F8 863 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 FBXO36Q8NEA4 188 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 OR52K1Q8NGK4 314 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 ZFYVE19Q96K21 471 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 SEMA3CQ99985 751 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 PLA2G2FQ9BZM2 168 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 ECT2Q9H8V3 914 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 PLAC1Q9HBJ0 212 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 ARNT2Q9HBZ2 717 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 THG1LQ9NWX6 298 aaKnown RBP12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 FAM53CQ9NYF3 392 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 UBP1Q9NZI7 540 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 PLAAQ9Y263 795 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 SLC27A6Q9Y2P4 619 aa12.16□□□□□ -0.46
EXOSC9-202ENST00000379663 AP3B1O00203 1094 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 ARNTLO00327 626 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 USP12O75317 370 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 GJB3O75712 270 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 ACSL3O95573 720 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 MT-CO1P00395 513 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 ELK3P41970 407 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 CD86P42081 329 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 GPX6P59796 221 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 DNAJC21Q5F1R6 531 aaKnown RBP12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 RALGPS1Q5JS13 557 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 TMEM215Q68D42 235 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 PARM1Q6UWI2 310 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 C12orf40Q86WS4 652 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 MPP5Q8N3R9 675 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 ATP11CQ8NB49 1132 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 PYROXD1Q8WU10 500 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 TTC17Q96AE7 1141 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 NSMCE3Q96MG7 304 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 FAM161BQ96MY7 647 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 NUDCD1Q96RS6 583 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 SH3GL2Q99962 352 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 TBL1YQ9BQ87 522 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 EBF3Q9H4W6 596 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 CHMP2BQ9UQN3 213 aa12.15□□□□□ -0.46
EXOSC9-202ENST00000379663 LOC285095A0A1B0GVY8 99 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 GRXCR2A6NFK2 248 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 ANHXE9PGG2 379 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 TRIM24O15164 1050 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 TULP3O75386 442 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 ZNF821O75541 412 aaPredicted RBP12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 SHBGP04278 402 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 SRCP12931 536 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 CES1P23141 567 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 EIF3BP55884 814 aaKnown RBP12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 WNT3AP56704 352 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 SULT2A1Q06520 285 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 ITKQ08881 620 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 CDH17Q12864 832 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 HTR4Q13639 388 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 EP400NLQ6ZTU2 488 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 MTSS1LQ765P7 747 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 ANKMY2Q8IV38 441 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 SH2D3CQ8N5H7 860 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 IPMKQ8NFU5 416 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 CHFRQ96EP1 664 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 XPO6Q96QU8 1125 aaKnown RBP12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 TRIB3Q96RU7 358 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 EBNA1BP2Q99848 306 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms