RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 K7EPI3 171 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 CAPN15O75808 1086 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 ZBTB11O95625 1053 aaPredicted RBP13.1□□□□□ -0.31
MSH5-204ENST00000375755 CYBAP13498 195 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 RABGGTBP53611 331 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 DPYSQ14117 519 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 GOLGA7BQ2TAP0 167 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 LSM12Q3MHD2 195 aaKnown RBP13.1□□□□□ -0.31
MSH5-204ENST00000375755 SLC9A4Q6AI14 798 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 NANOGP8Q6NSW7 305 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 PMF1Q6P1K2 205 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 XKR5Q6UX68 686 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 CENPSQ8N2Z9 138 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 BORCS5Q969J3 196 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 LHX5Q9H2C1 402 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 CLK4Q9HAZ1 481 aaKnown RBP13.1□□□□□ -0.31
MSH5-204ENST00000375755 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
MSH5-204ENST00000375755 H0YJX3 145 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 CCDC130P13994 396 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 IL4RP24394 825 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 GJA8P48165 433 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 INCA1Q0VD86 236 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 C15orf59Q2T9L4 293 aaPredicted RBP13.09□□□□□ -0.31
MSH5-204ENST00000375755 ZBED5Q49AG3 693 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 TMEM198Q66K66 360 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 CMC1Q7Z7K0 106 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 PLD6Q8N2A8 252 aaKnown RBP13.09□□□□□ -0.31
MSH5-204ENST00000375755 OR6B3Q8NGW1 331 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 HM13Q8TCT9 377 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 CLEC4CQ8WTT0 213 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 SOCS4Q8WXH5 440 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 MTMR10Q9NXD2 777 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 CDH7Q9ULB5 785 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 F5H423 210 aaPredicted RBP13.09□□□□□ -0.31
MSH5-204ENST00000375755 MX2P20592 715 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 MPSTP25325 297 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 CACNB2Q08289 660 aaPredicted RBP13.09□□□□□ -0.31
MSH5-204ENST00000375755 CDO1Q16878 200 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 ZNF829Q3KNS6 432 aaPredicted RBP13.09□□□□□ -0.31
MSH5-204ENST00000375755 ZNF362Q5T0B9 420 aaPredicted RBP13.09□□□□□ -0.31
MSH5-204ENST00000375755 TWF2Q6IBS0 349 aaKnown RBP13.09□□□□□ -0.31
MSH5-204ENST00000375755 CASC4Q6P4E1 433 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 DCLRE1AQ6PJP8 1040 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 FAM183BPQ6ZVS7 135 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 TBC1D15Q8TC07 691 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 MARK4Q96L34 752 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 NT5C1AQ9BXI3 368 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 HIPK3Q9H422 1215 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 PRDM16Q9HAZ2 1276 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 PIH1D1Q9NWS0 290 aaKnown RBP13.09□□□□□ -0.31
MSH5-204ENST00000375755 AP4S1Q9Y587 144 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 CROCCQ5TZA2 2017 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 BCLAF3A2AJT9 711 aaKnown RBP13.09□□□□□ -0.31
MSH5-204ENST00000375755 MED7O43513 233 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 CA12O43570 354 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 ALDH1A2O94788 518 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 C8BP07358 591 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 CD247P20963 164 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 TYK2P29597 1187 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 BCAR1P56945 870 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 C21orf59P57076 290 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 INSCQ1MX18 579 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 MTX3Q5HYI7 312 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 FAM102AQ5T9C2 384 aaPredicted RBP13.09□□□□□ -0.31
MSH5-204ENST00000375755 RWDD4Q6NW29 188 aaKnown RBP13.09□□□□□ -0.31
MSH5-204ENST00000375755 LYSMD3Q7Z3D4 306 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 SCUBE3Q8IX30 993 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 FAM47BQ8NA70 645 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 THAP11Q96EK4 314 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 TMA16Q96EY4 203 aaKnown RBP13.09□□□□□ -0.31
MSH5-204ENST00000375755 CIB1Q99828 191 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 GPATCH1Q9BRR8 931 aaKnown RBP13.09□□□□□ -0.31
MSH5-204ENST00000375755 CYP3A43Q9HB55 503 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 SLC8A2Q9UPR5 921 aa13.09□□□□□ -0.31
MSH5-204ENST00000375755 HTRA2O43464 458 aaPredicted RBP13.08□□□□□ -0.32
MSH5-204ENST00000375755 DUSP11O75319 330 aaKnown RBP13.08□□□□□ -0.32
MSH5-204ENST00000375755 VAPBO95292 243 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 CHRNA1P02708 482 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 CHRNGP07510 517 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 INHBBP09529 407 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 VDRP11473 427 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 ZNF12P17014 697 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 CA8P35219 290 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 CCR10P46092 362 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 RAB15P59190 212 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 ART3Q13508 389 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 ATP1A4Q13733 1029 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 STILQ15468 1287 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 STEAP4Q687X5 459 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 DDHD1Q8NEL9 900 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 NPAS2Q99743 824 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 TRPV6Q9H1D0 765 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 TRNAU1APQ9NX07 287 aaKnown RBP13.08□□□□□ -0.32
MSH5-204ENST00000375755 RNF186Q9NXI6 227 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 FADS3Q9Y5Q0 445 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 SCN10AQ9Y5Y9 1956 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.08□□□□□ -0.32
MSH5-204ENST00000375755 PTGESO14684 152 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 TFE3P19532 575 aaPredicted RBP13.08□□□□□ -0.32
MSH5-204ENST00000375755 ADORA2BP29275 332 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms