RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ANKMY1Q9P2S6 941 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 TEX264Q9Y6I9 313 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 SEPT4O43236 478 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 HCRTO43612 131 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 CLPXO76031 633 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 PIGRP01833 764 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 ERBB2P04626 1255 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 IGFBP6P24592 240 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 HOXA11P31270 313 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 AFF1P51825 1210 aaKnown RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 ATN1P54259 1190 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 GDF10P55107 478 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 PMS2P3Q13401 168 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 ZNF846Q147U1 533 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 PGAM4Q8N0Y7 254 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 KLHL32Q96NJ5 620 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 POLR1BQ9H9Y6 1135 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 PTPRHQ9HD43 1115 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 HMGXB4Q9UGU5 601 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 CDY2AQ9Y6F7 541 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 PDE4DIPQ5VU43 2346 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 RGSL1A5PLK6 1076 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 ZBTB14O43829 449 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 GPR32O75388 356 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 RECQL4O94761 1208 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 TPTEP56180 551 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 GALNT2Q10471 571 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 CEACAM7Q14002 265 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 TMEM132DQ14C87 1099 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 VWA5B1Q5TIE3 1220 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 ZBTB46Q86UZ6 589 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 SNX32Q86XE0 403 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 FEZF2Q8TBJ5 459 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 ZNF347Q96SE7 839 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 HERC2P3Q9BVR0 1158 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 ADAMTS10Q9H324 1103 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 CISHQ9NSE2 258 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 QPCTLQ9NXS2 382 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 DDX56Q9NY93 547 aaKnown RBP12.3□□□□□ -0.44
C9orf3-203ENST00000375315 SATB2Q9UPW6 733 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 LOXHD1Q8IVV2 1947 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 TRDMT1O14717 391 aaKnown RBP12.3□□□□□ -0.44
C9orf3-203ENST00000375315 KMOO15229 486 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 CHRNB1P11230 501 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 FGF3P11487 239 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-203ENST00000375315 DARSP14868 501 aaKnown RBP12.3□□□□□ -0.44
C9orf3-203ENST00000375315 MZF1P28698 734 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-203ENST00000375315 ATP6V0D1P61421 351 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 FAAH2Q6GMR7 532 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 TTC23LQ6PF05 361 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 ENOSF1Q7L5Y1 443 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 POLNQ7Z5Q5 900 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 TTC39CQ8N584 583 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 ACTL9Q8TC94 416 aa12.3□□□□□ -0.44
C9orf3-203ENST00000375315 USP13Q92995 863 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-203ENST00000375315 MTG1Q9BT17 334 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-203ENST00000375315 M0QZ92 97 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 PLOD2O00469 737 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 GCATO75600 419 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 ENO2P09104 434 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-203ENST00000375315 ENO3P13929 434 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-203ENST00000375315 PIK3R1P27986 724 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 SERPINB5P36952 375 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 OCA2Q04671 838 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 NME3Q13232 169 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 ZNF667Q5HYK9 610 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 PPM1LQ5SGD2 360 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 STXBP5Q5T5C0 1151 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 ZBTB49Q6ZSB9 765 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 WDR49Q8IV35 697 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 ZC3H7AQ8IWR0 971 aaKnown RBP12.29□□□□□ -0.44
C9orf3-203ENST00000375315 RNF148Q8N7C7 305 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 CAPSLQ8WWF8 208 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 ATP6V1E2Q96A05 226 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 VCPIP1Q96JH7 1222 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 SRRDQ9UH36 339 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 IPO11Q9UI26 975 aaKnown RBP12.29□□□□□ -0.44
C9orf3-203ENST00000375315 COQ4Q9Y3A0 265 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 CENPBD1B2RD01 187 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 CLDN25C9JDP6 229 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 CSPG5O95196 566 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 FGFR3P22607 806 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 CDKN2BP42772 138 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 SERPINB9P50453 376 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 DYNLT1P63172 113 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 ART3Q13508 389 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 PERM1Q5SV97 790 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 MROH9Q5TGP6 573 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 C15orf39Q6ZRI6 1047 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 LINC01465Q8N7H1 131 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 RP9Q8TA86 221 aaKnown RBP12.29□□□□□ -0.44
C9orf3-203ENST00000375315 EFHD1Q9BUP0 239 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 CNGB3Q9NQW8 809 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 PARVAQ9NVD7 372 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 SIX4Q9UIU6 781 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 SNX13Q9Y5W8 968 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 LRRC37A2A6NM11 1700 aa12.29□□□□□ -0.44
C9orf3-203ENST00000375315 CXorf49A8MYA2 514 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 NSUN2Q08J23 767 aaKnown RBP eCLIP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 GRSF1Q12849 480 aaKnown RBP eCLIP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms