RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 AKT2P31751 481 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 GKP32189 559 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 HTR7P34969 479 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 KLHL30Q0D2K2 578 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 BNIP3Q12983 259 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 SEL1L3Q68CR1 1132 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 CCNI2Q6ZMN8 369 aaPredicted RBP22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 PARS2Q7L3T8 475 aaKnown RBP22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 ZNF354CQ86Y25 554 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 DNAAF5Q86Y56 855 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 UMODL1-AS1Q8N2C9 162 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 RYBPQ8N488 228 aaPredicted RBP22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 OR6K2Q8NGY2 324 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 CASKIN2Q8WXE0 1202 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 MYOCQ99972 504 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 KLC2Q9H0B6 622 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 FZD3Q9NPG1 666 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 ZMIZ1Q9ULJ6 1067 aa22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 COL5A1P20908 1838 aaPredicted RBP22.06■■□□□ 1.12
CCDC28B-201ENST00000373602 FGF10O15520 208 aaPredicted RBP22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 TMCC1O94876 653 aa22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 POP4O95707 220 aaKnown RBP22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 MYLK3Q32MK0 819 aa22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 PARP15Q460N3 678 aa22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 INO80DQ53TQ3 878 aaPredicted RBP22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 ZNF805Q5CZA5 627 aa22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 KIAA1161Q6NSJ0 714 aa22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 TMPRSS7Q7RTY8 843 aa22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 KANSL1Q7Z3B3 1105 aa22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 ARFGAP1Q8N6T3 406 aa22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 FNIP1Q8TF40 1166 aa22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 HMCESQ96FZ2 354 aa22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 FEM1CQ96JP0 617 aa22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 GPATCH2LQ9NWQ4 482 aa22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 CNOT8Q9UFF9 292 aaKnown RBP22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 AP4E1Q9UPM8 1137 aa22.05■■□□□ 1.12
CCDC28B-201ENST00000373602 C16orf96A6NNT2 1141 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 EIF3CLB5ME19 914 aaKnown RBP22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 KRIT1O00522 736 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 THEGLP0DJG4 465 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 SKILP12757 684 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 TPI1P60174 286 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 RPS21P63220 83 aaKnown RBP22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 TPM4P67936 248 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 FANCCQ00597 558 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 SERINC3Q13530 473 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 ATXN7L2Q5T6C5 722 aaPredicted RBP22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 LUZP1Q86V48 1076 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 ZSCAN30Q86W11 494 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 RAB7BQ96AH8 199 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 GDAP1L1Q96MZ0 367 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 EIF3CQ99613 913 aaKnown RBP22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 OSBPL1AQ9BXW6 950 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 SLC17A9Q9BYT1 436 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 TRIM7Q9C029 511 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 DONSONQ9NYP3 566 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 HS3ST3A1Q9Y663 406 aa22.04■■□□□ 1.12
CCDC28B-201ENST00000373602 TRPM6Q9BX84 2022 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 LDOC1O95751 146 aaPredicted RBP22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 UGT2B4P06133 528 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 PBX1P40424 430 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 ABL2P42684 1182 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 FGL2Q14314 439 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 CA9Q16790 459 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 ERMARDQ5T6L9 678 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 GCNT7Q6ZNI0 430 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 ABI3BPQ7Z7G0 1075 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 EID2Q8N6I1 236 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 FAM174AQ8TBP5 190 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 ZCCHC14Q8WYQ9 949 aaKnown RBP22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 ZNF653Q96CK0 615 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 CNDP2Q96KP4 475 aaKnown RBP22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 PEBP4Q96S96 227 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 DHX35Q9H5Z1 703 aaKnown RBP22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 PLXNB3Q9ULL4 1909 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 PTPRBP23467 1997 aa22.03■■□□□ 1.12
CCDC28B-201ENST00000373602 A0A1W2PQJ5 194 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 ENC1O14682 589 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 TSPAN6O43657 245 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 RNF8O76064 485 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 CAPNS1P04632 268 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 MYBL1P10243 752 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 CLDN2P57739 230 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 RAD51Q06609 339 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 OR13H1Q8NG92 308 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 TRIM11Q96F44 468 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 KLHL32Q96NJ5 620 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 SNRNP25Q9BV90 132 aaKnown RBP22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 ISCUQ9H1K1 167 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 LRRC19Q9H756 370 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 KLHL11Q9NVR0 708 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 PCSK1NQ9UHG2 260 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 MFHAS1Q9Y4C4 1052 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 PCDHGA1Q9Y5H4 931 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 SCINQ9Y6U3 715 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 IGF2RP11717 2491 aa22.02■■□□□ 1.12
CCDC28B-201ENST00000373602 FRYQ5TBA9 3013 aa22.01■■□□□ 1.11
CCDC28B-201ENST00000373602 EEF2KO00418 725 aaKnown RBP22.01■■□□□ 1.11
CCDC28B-201ENST00000373602 IGSF6O95976 241 aa22.01■■□□□ 1.11
CCDC28B-201ENST00000373602 PAK4O96013 591 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms