RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 OR12D3Q9UGF7 316 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 FZD10Q9ULW2 581 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 USH1CQ9Y6N9 552 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 DRGXA6NNA5 263 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 E9PAM4 449 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 DCTN3O75935 186 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 MIPP30301 263 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 PCK1P35558 622 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 GAS6Q14393 721 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 ZKSCAN8Q15776 578 aaPredicted RBP20.85■□□□□ 0.93
SYNC-201ENST00000373484 GEN1Q17RS7 908 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 CIR1Q86X95 450 aaPredicted RBP20.85■□□□□ 0.93
SYNC-201ENST00000373484 APLFQ8IW19 511 aaPredicted RBP20.85■□□□□ 0.93
SYNC-201ENST00000373484 KATNAL2Q8IYT4 538 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 CARNMT1Q8N4J0 409 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 TEX9Q8N6V9 391 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.85■□□□□ 0.93
SYNC-201ENST00000373484 ANKRD42Q8N9B4 389 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 MGARPQ8TDB4 240 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 PEBP4Q96S96 227 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 PITPNM3Q9BZ71 974 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 CACNA1IQ9P0X4 2223 aa20.85■□□□□ 0.93
SYNC-201ENST00000373484 CHD5Q8TDI0 1954 aa20.84■□□□□ 0.93
SYNC-201ENST00000373484 PRRT4C9JH25 899 aa20.84■□□□□ 0.93
SYNC-201ENST00000373484 PROSCO94903 275 aa20.84■□□□□ 0.93
SYNC-201ENST00000373484 ALDH3A1P30838 453 aa20.84■□□□□ 0.93
SYNC-201ENST00000373484 CETN2P41208 172 aa20.84■□□□□ 0.93
SYNC-201ENST00000373484 RASSF2P50749 326 aa20.84■□□□□ 0.93
SYNC-201ENST00000373484 CDH18Q13634 790 aa20.84■□□□□ 0.93
SYNC-201ENST00000373484 KCTD19Q17RG1 926 aaPredicted RBP20.84■□□□□ 0.93
SYNC-201ENST00000373484 EFHC2Q5JST6 749 aa20.84■□□□□ 0.93
SYNC-201ENST00000373484 MANEALQ5VSG8 457 aa20.84■□□□□ 0.93
SYNC-201ENST00000373484 DAB2IPQ5VWQ8 1189 aa20.84■□□□□ 0.93
SYNC-201ENST00000373484 CYP4V2Q6ZWL3 525 aaPredicted RBP20.84■□□□□ 0.93
SYNC-201ENST00000373484 KIAA0907Q7Z7F0 614 aaPredicted RBP20.84■□□□□ 0.93
SYNC-201ENST00000373484 ZNF398Q8TD17 642 aa20.84■□□□□ 0.93
SYNC-201ENST00000373484 MAGEB5Q9BZ81 275 aa20.84■□□□□ 0.93
SYNC-201ENST00000373484 PHACTR1Q9C0D0 580 aa20.84■□□□□ 0.93
SYNC-201ENST00000373484 SSU72Q9NP77 194 aaKnown RBP20.84■□□□□ 0.93
SYNC-201ENST00000373484 PCSK1NQ9UHG2 260 aa20.84■□□□□ 0.93
SYNC-201ENST00000373484 ANTXRLA6NF34 631 aa20.83■□□□□ 0.93
SYNC-201ENST00000373484 PRPSAP2O60256 369 aa20.83■□□□□ 0.93
SYNC-201ENST00000373484 KIR2DL1P43626 348 aaPredicted RBP20.83■□□□□ 0.93
SYNC-201ENST00000373484 CGB2Q6NT52 195 aa20.83■□□□□ 0.93
SYNC-201ENST00000373484 BZW1Q7L1Q6 419 aaKnown RBP20.83■□□□□ 0.93
SYNC-201ENST00000373484 CHST9Q7L1S5 443 aa20.83■□□□□ 0.93
SYNC-201ENST00000373484 DTWD2Q8NBA8 298 aa20.83■□□□□ 0.93
SYNC-201ENST00000373484 LMLNQ96KR4 655 aa20.83■□□□□ 0.93
SYNC-201ENST00000373484 ABCB8Q9NUT2 735 aa20.83■□□□□ 0.93
SYNC-201ENST00000373484 PPARGC1AQ9UBK2 798 aaKnown RBP20.83■□□□□ 0.93
SYNC-201ENST00000373484 FETUBQ9UGM5 382 aa20.83■□□□□ 0.93
SYNC-201ENST00000373484 USP18Q9UMW8 372 aa20.83■□□□□ 0.93
SYNC-201ENST00000373484 FAM72CH0Y354 149 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 H0Y626 953 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 TRAFD1O14545 582 aaPredicted RBP20.83■□□□□ 0.92
SYNC-201ENST00000373484 CLDN11O75508 207 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 CNTN5O94779 1100 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 ASMTLO95671 621 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 RPSAP08865 295 aaKnown RBP20.83■□□□□ 0.92
SYNC-201ENST00000373484 CREB1P16220 341 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 CDH4P55283 916 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 SEC13P55735 322 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 MTAPQ13126 283 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 SPARCL1Q14515 664 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 ALFQ53S48 1182 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 FSCBQ5H9T9 825 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 FAM72AQ5TYM5 149 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 FAM72DQ6L9T8 149 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 FAM72BQ86X60 149 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 CCDC117Q8IWD4 279 aaPredicted RBP20.83■□□□□ 0.92
SYNC-201ENST00000373484 RHOT1Q8IXI2 618 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 EXD1Q8NHP7 514 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 DENND1AQ8TEH3 1009 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 USP33Q8TEY7 942 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 RMDN2Q96LZ7 410 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 SNRNP25Q9BV90 132 aaKnown RBP20.83■□□□□ 0.92
SYNC-201ENST00000373484 L3MBTL1Q9Y468 752 aa20.83■□□□□ 0.92
SYNC-201ENST00000373484 MUC22E2RYF6 1773 aaPredicted RBP20.83■□□□□ 0.92
SYNC-201ENST00000373484 PABPC1P11940 636 aaKnown RBP20.82■□□□□ 0.92
SYNC-201ENST00000373484 L1CAMP32004 1257 aa20.82■□□□□ 0.92
SYNC-201ENST00000373484 CD70P32970 193 aa20.82■□□□□ 0.92
SYNC-201ENST00000373484 NUBP1P53384 320 aa20.82■□□□□ 0.92
SYNC-201ENST00000373484 MRPS21P82921 87 aaKnown RBP20.82■□□□□ 0.92
SYNC-201ENST00000373484 LMAN2Q12907 356 aa20.82■□□□□ 0.92
SYNC-201ENST00000373484 PKN3Q6P5Z2 889 aa20.82■□□□□ 0.92
SYNC-201ENST00000373484 MAMSTRQ6ZN01 415 aa20.82■□□□□ 0.92
SYNC-201ENST00000373484 TRABD2AQ86V40 505 aa20.82■□□□□ 0.92
SYNC-201ENST00000373484 PYROXD2Q8N2H3 581 aa20.82■□□□□ 0.92
SYNC-201ENST00000373484 RPLP0P6Q8NHW5 317 aa20.82■□□□□ 0.92
SYNC-201ENST00000373484 WFIKKN2Q8TEU8 576 aa20.82■□□□□ 0.92
SYNC-201ENST00000373484 HCN2Q9UL51 889 aa20.82■□□□□ 0.92
SYNC-201ENST00000373484 CORO1CQ9ULV4 474 aaPredicted RBP20.82■□□□□ 0.92
SYNC-201ENST00000373484 AP4E1Q9UPM8 1137 aa20.82■□□□□ 0.92
SYNC-201ENST00000373484 NEU3Q9UQ49 428 aa20.82■□□□□ 0.92
SYNC-201ENST00000373484 CHURC1-FNTBB4DL54 471 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 LRIG2O94898 1065 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 TCF4P15884 667 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 SEMA3BQ13214 749 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 EIF4HQ15056 248 aaKnown RBP20.81■□□□□ 0.92
SYNC-201ENST00000373484 WASHC2DQ5SRD0 308 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms