RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 NFKBIZQ9BYH8 718 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 TRIM4Q9C037 500 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 LSG1Q9H089 658 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 ADAMTS10Q9H324 1103 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 DNAJC18Q9H819 358 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 ZNF287Q9HBT7 754 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SLC35D1Q9NTN3 355 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 DNAJC28Q9NX36 388 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 ETAA1Q9NY74 926 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 VPS18Q9P253 973 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 MTRF1LQ9UGC7 380 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 CPSF3Q9UKF6 684 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 LIPT1Q9Y234 373 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 CLDN16Q9Y5I7 305 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 ATP8B3O60423 1300 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 WDR19Q8NEZ3 1342 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 ZSCAN5CA6NGD5 496 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 DDTLA6NHG4 134 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 ACOD1A6NK06 481 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 PER2O15055 1255 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 MEFVO15553 781 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 BUB1O43683 1085 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SLC25A17O43808 307 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 NDUFS2O75306 463 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 METTL18O95568 372 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 IFNB1P01574 187 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 HNRNPA1P09651 372 aaKnown RBP eCLIP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 WEE2P0C1S8 567 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 C6P13671 934 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 CCNA2P20248 432 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 CST5P28325 142 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 PSMB10P40306 273 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 ECI1P42126 302 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 NRIP1P48552 1158 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 LUMP51884 338 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 GBX2P52951 348 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 AP3M2P53677 418 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 EIF4A1P60842 406 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 FKBP1AP62942 108 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 CYP4F8P98187 520 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 GUCY1A3Q02108 690 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 BNIP1Q12981 228 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 PAK1Q13153 545 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 KCNAB2Q13303 367 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 LAMB3Q13751 1172 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 BMPR2Q13873 1038 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SPIDRQ14159 915 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 GPNMBQ14956 572 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 NTRK3Q16288 839 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 DEPDC1Q5TB30 811 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 CES4AQ5XG92 561 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 E4F1Q66K89 784 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 CPLX4Q7Z7G2 160 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 ULK2Q8IYT8 1036 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 TXLNBQ8N3L3 684 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 CELF5Q8N6W0 485 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 POMGNT2Q8NAT1 580 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 FANCBQ8NB91 859 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SHCBP1Q8NEM2 672 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 ERMNQ8TAM6 284 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 LINC01599Q8WXQ3 324 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SDCCAG3Q96C92 435 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 CYFIP2Q96F07 1278 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 MAML3Q96JK9 1138 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 FAM167AQ96KS9 214 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 FAM118BQ9BPY3 351 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 CD244Q9BZW8 370 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 EPC1Q9H2F5 836 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 DPH5Q9H2P9 285 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SMARCAD1Q9H4L7 1026 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 MRPL44Q9H9J2 332 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 IL1RAPL2Q9NP60 686 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 PFDN4Q9NQP4 134 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 OXSMQ9NWU1 459 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 TAB2Q9NYJ8 693 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 NINJ2Q9NZG7 142 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 HSPBP1Q9NZL4 362 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 MYO1AQ9UBC5 1043 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 MALT1Q9UDY8 824 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 CA14Q9ULX7 337 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 PCDHA9Q9Y5H5 950 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 LYVE1Q9Y5Y7 322 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 F8P00451 2351 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 A0A088AWK7 358 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 LRRD1A4D1F6 860 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 BLACEA4D250 179 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 FADS2P1A8MWK0 482 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 ISM1B1AKI9 464 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 E7EVH7 732 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 PTGES3LE9PB15 166 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 H7BY64 318 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 BIN1O00499 593 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 ANGPT2O15123 496 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 TGM5O43548 720 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 TBC1D4O60343 1298 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 GJB3O75712 270 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 THBDP07204 575 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 PFKMP08237 780 aa3.62□□□□□ -1.83
ECHDC1-205ENST00000368295 ITGA5P08648 1049 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms