RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 PIK3R3Q92569 461 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 GINS4Q9BRT9 223 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 SIAEQ9HAT2 523 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 ZDHHC18Q9NUE0 388 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 FKBP14Q9NWM8 211 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 PRKAB1Q9Y478 270 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 GAS2O43903 313 aaKnown RBP11.85□□□□□ -0.51
PRKN-206ENST00000366898 CLIC3O95833 236 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 S100A6P06703 90 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 RPL35P42766 123 aaKnown RBP11.85□□□□□ -0.51
PRKN-206ENST00000366898 HK2P52789 917 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 ABCE1P61221 599 aaKnown RBP11.85□□□□□ -0.51
PRKN-206ENST00000366898 FKBP1AP62942 108 aaKnown RBP11.85□□□□□ -0.51
PRKN-206ENST00000366898 CYP4F2P78329 520 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 CYP4F3Q08477 520 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 KLF10Q13118 480 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 PCSK7Q16549 785 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 PLET1Q6UQ28 207 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 ATG16L2Q8NAA4 619 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 PPP1R10Q96QC0 940 aaKnown RBP11.85□□□□□ -0.51
PRKN-206ENST00000366898 KLHL31Q9H511 634 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 TUT1Q9H6E5 874 aaKnown RBP11.85□□□□□ -0.51
PRKN-206ENST00000366898 RPF1Q9H9Y2 349 aaKnown RBP11.85□□□□□ -0.51
PRKN-206ENST00000366898 CACYBPQ9HB71 228 aaKnown RBP11.85□□□□□ -0.51
PRKN-206ENST00000366898 FAM49BQ9NUQ9 324 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 ING3Q9NXR8 418 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 DNAJB4Q9UDY4 337 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.85□□□□□ -0.51
PRKN-206ENST00000366898 TPRKBQ9Y3C4 175 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 UBIAD1Q9Y5Z9 338 aa11.85□□□□□ -0.51
PRKN-206ENST00000366898 TCF7P36402 384 aaPredicted RBP11.84□□□□□ -0.51
PRKN-206ENST00000366898 GP5P40197 560 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 JAM2P57087 298 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 FMO1Q01740 532 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 TRAP1Q12931 704 aaKnown RBP11.84□□□□□ -0.51
PRKN-206ENST00000366898 HERC3Q15034 1050 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 LY6KQ17RY6 165 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 ZNF667Q5HYK9 610 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 AARS2Q5JTZ9 985 aaKnown RBP11.84□□□□□ -0.51
PRKN-206ENST00000366898 COLEC12Q5KU26 742 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 GPAT2Q6NUI2 795 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 DENND1BQ6P3S1 775 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 MMAAQ8IVH4 418 aaKnown RBP11.84□□□□□ -0.51
PRKN-206ENST00000366898 STX19Q8N4C7 294 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 NSMCE2Q96MF7 247 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 TTYH2Q9BSA4 534 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 SAV1Q9H4B6 383 aaPredicted RBP11.84□□□□□ -0.51
PRKN-206ENST00000366898 ADAMTS6Q9UKP5 1117 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 TRPC5OSA6NMA1 111 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 H0YJX3 145 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 EXTL3O43909 919 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 SNAP91O60641 907 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 SUPT7LO94864 414 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 PIK3R1P27986 724 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 RAP1GAPP47736 663 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 CLCN3P51790 818 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 BNC1Q01954 994 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 SF3B4Q15427 424 aaKnown RBP eCLIP11.84□□□□□ -0.51
PRKN-206ENST00000366898 DSELQ8IZU8 1212 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 RASGEF1CQ8N431 466 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 HAPLN3Q96S86 360 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 MMP19Q99542 508 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 KCTD14Q9BQ13 255 aaPredicted RBP11.84□□□□□ -0.51
PRKN-206ENST00000366898 EML4Q9HC35 981 aaKnown RBP11.84□□□□□ -0.51
PRKN-206ENST00000366898 HPS4Q9NQG7 708 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 GMIPQ9P107 970 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 PAK5Q9P286 719 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 TRIM38O00635 465 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 PRPF4O43172 522 aaKnown RBP eCLIP11.84□□□□□ -0.51
PRKN-206ENST00000366898 RECQL5O94762 991 aaPredicted RBP11.84□□□□□ -0.51
PRKN-206ENST00000366898 VAPBO95292 243 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 GJB1P08034 283 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 OLR1P78380 273 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 MGAT5Q09328 741 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 TOP3AQ13472 1001 aaPredicted RBP11.84□□□□□ -0.51
PRKN-206ENST00000366898 CUL2Q13617 745 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 DLG2Q15700 870 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 MFSD7Q6UXD7 560 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 SLC15A4Q8N697 577 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 EMC1Q8N766 993 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 NAV1Q8NEY1 1877 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 OR6P1Q8NGX9 317 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 CLEC4DQ8WXI8 215 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 VMP1Q96GC9 406 aa11.84□□□□□ -0.51
PRKN-206ENST00000366898 POLR3BQ9NW08 1133 aaPredicted RBP11.84□□□□□ -0.51
PRKN-206ENST00000366898 PRR23AA6NEV1 266 aa11.83□□□□□ -0.52
PRKN-206ENST00000366898 ICMTO60725 284 aa11.83□□□□□ -0.52
PRKN-206ENST00000366898 TRIM13O60858 407 aa11.83□□□□□ -0.52
PRKN-206ENST00000366898 AVILO75366 819 aa11.83□□□□□ -0.52
PRKN-206ENST00000366898 CLPXO76031 633 aa11.83□□□□□ -0.52
PRKN-206ENST00000366898 PIGNO95427 931 aa11.83□□□□□ -0.52
PRKN-206ENST00000366898 RGS7P49802 495 aa11.83□□□□□ -0.52
PRKN-206ENST00000366898 NAGLUP54802 743 aa11.83□□□□□ -0.52
PRKN-206ENST00000366898 MYL6P60660 151 aa11.83□□□□□ -0.52
PRKN-206ENST00000366898 DGKKQ5KSL6 1271 aa11.83□□□□□ -0.52
PRKN-206ENST00000366898 FAM102AQ5T9C2 384 aaPredicted RBP11.83□□□□□ -0.52
PRKN-206ENST00000366898 FOXB2Q5VYV0 432 aa11.83□□□□□ -0.52
PRKN-206ENST00000366898 CYP20A1Q6UW02 462 aa11.83□□□□□ -0.52
PRKN-206ENST00000366898 CYP2U1Q7Z449 544 aa11.83□□□□□ -0.52
PRKN-206ENST00000366898 VSIG10LQ86VR7 867 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms