RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 MAGEE1Q9HCI5 957 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 ZNF879B4DU55 563 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 BCKDKO14874 412 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 CST8O60676 142 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 PTSQ03393 145 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 WDR72Q3MJ13 1102 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 ISOC1Q96CN7 298 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 AHCYL2Q96HN2 611 aaKnown RBP11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 DIRAS2Q96HU8 199 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 ATP13A3Q9H7F0 1226 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 RNASEH1O60930 286 aaKnown RBP11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 RHOBTB3O94955 611 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 NOL9Q5SY16 702 aaKnown RBP11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 RAVER1Q8IY67 606 aaKnown RBP11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 CATSPERZQ9NTU4 200 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 PCDH8O95206 1070 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 POLBP06746 335 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 SPP2Q13103 211 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 GOLGA7BQ2TAP0 167 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 HAUS6Q7Z4H7 955 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 TPK1Q9H3S4 243 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 ACSS2Q9NR19 701 aa11.18□□□□□ -0.62
CDC42BPA-205ENST00000366769 H3BN98 237 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 TM7SF2O76062 418 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 RECQL5O94762 991 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 PRKAA2P54646 552 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 ZNF268Q14587 947 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 PMF1Q6P1K2 205 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 DNAJB7Q7Z6W7 309 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 GAD1Q99259 594 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 FAM53CQ9NYF3 392 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 DHRS12A0PJE2 317 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 C2orf74A8MZ97 194 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 UGT3A1Q6NUS8 523 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 SLC26A11Q86WA9 606 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 JPH1Q9HDC5 661 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 CDH9Q9ULB4 789 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 FAM220BPB1ANY3 271 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 SERPINA6P08185 405 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 WARSP23381 471 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 IDH2P48735 452 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 NPEPPSP55786 919 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 ITGA1P56199 1179 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 ZNF177Q13360 481 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 SEMA6BQ9H3T3 888 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 MIEF1Q9NQG6 463 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 GRHL1Q9NZI5 618 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 ZNF112Q9UJU3 913 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 SH3BGRLO75368 114 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 RAB2BQ8WUD1 216 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 EIF2AK1Q9BQI3 630 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 hCG_1984214I3L0E3 225 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 BBOX1O75936 387 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 FGD3Q5JSP0 725 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 NEK7Q8TDX7 302 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 JPH3Q8WXH2 748 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 ITM2CQ9NQX7 267 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 TRPM5Q9NZQ8 1165 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 NOL4O94818 638 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 TDP2O95551 362 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 IL18Q14116 193 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 RMND5AQ9H871 391 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 ABCA1O95477 2261 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 UNCXA6NJT0 531 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 KPNA6O60684 536 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 NCAM1P13591 858 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 TIGD4Q8IY51 512 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 SERAC1Q96JX3 654 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 OR2B2Q9GZK3 357 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 VTI1BQ9UEU0 232 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 GLRA3O75311 464 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 TMEM132BQ14DG7 1078 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 LCN1P1Q5VSP4 162 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 CARNMT1Q8N4J0 409 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 PRKD2Q9BZL6 878 aa11.17□□□□□ -0.62
CDC42BPA-205ENST00000366769 SF3B1O75533 1304 aaKnown RBP eCLIP11.17□□□□□ -0.623e-6■■■■■ 75.9
CDC42BPA-205ENST00000366769 FMO3P31513 532 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 MCCD1P59942 119 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 BTN3A2P78410 334 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 ILF2Q12905 390 aaKnown RBP11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 CACUL1Q86Y37 369 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 OR8K3Q8NH51 312 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 FBXO30Q8TB52 745 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 TDRD3Q9H7E2 651 aaKnown RBP11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 TBC1D24Q9ULP9 559 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 SDR42E2A6NKP2 422 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 PLD2O14939 933 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 ACADMP11310 421 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 TBCDQ9BTW9 1192 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 SHOC2Q9UQ13 582 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 TBX3O15119 743 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 LTFP02788 710 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 SSTR1P30872 391 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 STK11Q15831 433 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 C21orf62-AS1Q17RA5 79 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 SPESP1Q6UW49 350 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 FAM20CQ8IXL6 584 aa11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 EIF3KQ9UBQ5 218 aaKnown RBP11.16□□□□□ -0.62
CDC42BPA-205ENST00000366769 GTF3C4Q9UKN8 822 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms