RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 EIF2S3LQ2VIR3 472 aaKnown RBP17.41■□□□□ 0.38
COL27A1-201ENST00000356083 N4BP2L1Q5TBK1 243 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-201ENST00000356083 OFCC1Q8IZS5 231 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 C12orf50Q8NA57 414 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-201ENST00000356083 LMLNQ96KR4 655 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 PAFAH2Q99487 392 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 RNF121Q9H920 327 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 DNTTP04053 509 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 PON1P27169 355 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 CD86P42081 329 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 FXR1P51114 621 aaKnown RBP eCLIP17.41■□□□□ 0.38
COL27A1-201ENST00000356083 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.41■□□□□ 0.383e-7■□□□□ 10
COL27A1-201ENST00000356083 TRIM40Q6P9F5 258 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 CHERPQ8IWX8 916 aaKnown RBP17.41■□□□□ 0.38
COL27A1-201ENST00000356083 SLC4A11Q8NBS3 891 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 SUN3Q8TAQ9 357 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 QRFPRQ96P65 431 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 CKLFQ9UBR5 152 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 STOML2Q9UJZ1 356 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 ROBO2Q9HCK4 1378 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 KDM6BO15054 1643 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 CCDC162PA2VCL2 907 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 ATP5C1P36542 298 aaKnown RBP17.41■□□□□ 0.38
COL27A1-201ENST00000356083 MNDAP41218 407 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 SEC13P55735 322 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 LRRC34Q8IZ02 419 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 GCATO75600 419 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 PIRTP0C851 137 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 SAGP10523 405 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-201ENST00000356083 ABCG1P45844 678 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 IRF8Q02556 426 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 DGUOKQ16854 277 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 PAGE2Q7Z2X7 111 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 HTATIP2Q9BUP3 242 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 FAIM2Q9BWQ8 316 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 ATAD3AQ9NVI7 634 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 MOCS1Q9NZB8 636 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 ASF1AQ9Y294 204 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 NOX1Q9Y5S8 564 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 MSX1P28360 303 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 SCNN1AP37088 669 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 CRADDP78560 199 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 WDR93Q6P2C0 686 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 ZNF276Q8N554 614 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 DNAJB14Q8TBM8 379 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 CYP3A43Q9HB55 503 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 DCXO43602 365 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 NFIAQ12857 509 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 LRRC70Q7Z2Q7 622 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 METTL16Q86W50 562 aaKnown RBP17.4■□□□□ 0.38
COL27A1-201ENST00000356083 UBR7Q8N806 425 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 OR6K2Q8NGY2 324 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 CHD4Q14839 1912 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 KPNA4O00629 521 aaPredicted RBP17.4■□□□□ 0.38
COL27A1-201ENST00000356083 FBXO21O94952 628 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 ETS1P14921 441 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 ADORA2AP29274 412 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 FSCN1Q16658 493 aaKnown RBP17.4■□□□□ 0.38
COL27A1-201ENST00000356083 TSEN15Q8WW01 171 aaKnown RBP17.4■□□□□ 0.38
COL27A1-201ENST00000356083 NOD2Q9HC29 1040 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 ABCB10Q9NRK6 738 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 ULK1O75385 1050 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 PKNOX1P55347 436 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 TCEAL6Q6IPX3 200 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 C16orf86Q6ZW13 317 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 ZBTB46Q86UZ6 589 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 OR6Y1Q8NGX8 325 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 HAVCR1Q96D42 359 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 MTA3Q9BTC8 594 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 TRMT13Q9NUP7 481 aaKnown RBP17.4■□□□□ 0.38
COL27A1-201ENST00000356083 SLCO1B7G3V0H7 640 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 CYP4B1P13584 511 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 RXRGP48443 463 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 MYBPC2Q14324 1141 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 CCNG2Q16589 344 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 CRY2Q49AN0 593 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 NEK5Q6P3R8 708 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 TEX47Q8TBZ9 253 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 PTCD2Q8WV60 388 aaKnown RBP17.4■□□□□ 0.38
COL27A1-201ENST00000356083 ADAM7Q9H2U9 754 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 XPR1Q9UBH6 696 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 CYB5AP00167 134 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 CARTPTQ16568 116 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 FRRS1Q6ZNA5 592 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 USP38Q8NB14 1042 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 TRAPPC12Q8WVT3 735 aa17.4■□□□□ 0.38
COL27A1-201ENST00000356083 SLC25A14O95258 325 aaPredicted RBP17.39■□□□□ 0.38
COL27A1-201ENST00000356083 ICAM1P05362 532 aa17.39■□□□□ 0.38
COL27A1-201ENST00000356083 INSRRP14616 1297 aa17.39■□□□□ 0.38
COL27A1-201ENST00000356083 CALB2P22676 271 aa17.39■□□□□ 0.38
COL27A1-201ENST00000356083 RPA1P27694 616 aa17.39■□□□□ 0.38
COL27A1-201ENST00000356083 MED22Q15528 200 aa17.39■□□□□ 0.38
COL27A1-201ENST00000356083 SAMD4BQ5PRF9 694 aaKnown RBP17.39■□□□□ 0.38
COL27A1-201ENST00000356083 CWF19L1Q69YN2 538 aaKnown RBP17.39■□□□□ 0.38
COL27A1-201ENST00000356083 COPS4Q9BT78 406 aa17.39■□□□□ 0.38
COL27A1-201ENST00000356083 SIRPGQ9P1W8 387 aa17.39■□□□□ 0.38
COL27A1-201ENST00000356083 STARD13Q9Y3M8 1113 aa17.39■□□□□ 0.38
COL27A1-201ENST00000356083 TUFMP49411 452 aaKnown RBP17.39■□□□□ 0.37
COL27A1-201ENST00000356083 CHN2P52757 468 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 MFSD10Q14728 455 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms