RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 AGXT2Q9BYV1 514 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 PTTG3PQ9NZH4 202 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 SYNJ2BP-COX16A0A087WUM0 186 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 RPLP0P05388 317 aaKnown RBP8.1□□□□□ -1.11
HTT-201ENST00000355072 TGFB3P10600 412 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 FGFR3P22607 806 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 ATF7IP2Q5U623 682 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 TWF2Q6IBS0 349 aaKnown RBP8.1□□□□□ -1.11
HTT-201ENST00000355072 LENG9Q96B70 501 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 COX16Q9P0S2 106 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 FER1L4A9Z1Z3 1794 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 CST8O60676 142 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 PGK1P00558 417 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 CCNB1P14635 433 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 NME3Q13232 169 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 E2F2Q14209 437 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 DPP9Q86TI2 863 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 ZDHHC15Q96MV8 337 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 CST11Q9H112 138 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 PRKAG3Q9UGI9 489 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 INPP5FQ9Y2H2 1132 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 TRIM38O00635 465 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 DHX15O43143 795 aaKnown RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 H6PDO95479 791 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 DGKAP23743 735 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 SLC6A4P31645 630 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 BTKQ06187 659 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 FSTL5Q8N475 847 aaPredicted RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 SEPT5Q99719 369 aaPredicted RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 GTPBP2Q9BX10 602 aaKnown RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 IKZF3Q9UKT9 509 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 CRHR1P34998 444 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 RBM44Q6ZP01 1051 aaKnown RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 FAM71DQ8N9W8 422 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 SH3RF3Q8TEJ3 882 aaPredicted RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 TAMM41Q96BW9 452 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 SERPINB11Q96P15 392 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 MMP27Q9H306 513 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 M0R233 179 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 CYP26A1O43174 497 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 GSTM1P09488 218 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 HTR2AP28223 471 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 SLCO6A1Q86UG4 719 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 CREG2Q8IUH2 290 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 SAMD14Q8IZD0 417 aaPredicted RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 UTP15Q8TED0 518 aaKnown RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 NELL1Q92832 810 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 SIK3Q9Y2K2 1263 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 SPEF1Q9Y4P9 236 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 GMFGO60234 142 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 BCAMP50895 628 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 CRY1Q16526 586 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 ARHGAP15Q53QZ3 475 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 STXBP5Q5T5C0 1151 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 ZNF767PQ75MW2 155 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 FAM228AQ86W67 206 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 APOBEC3FQ8IUX4 373 aaKnown RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 TMEM45AQ9NWC5 275 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 FAM86C2PA6NEL3 165 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 GRAP2O75791 330 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 HMGCRP04035 888 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 ATP6V0D1P61421 351 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 PYDC2Q56P42 97 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 LINC00299Q6ZSB3 139 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 ADGRF4Q8IZF3 695 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 TTYH1Q9H313 450 aaPredicted RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 FAM228BP0C875 321 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 GALNTL6Q49A17 601 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 KCTD1Q719H9 257 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 RNF25Q96BH1 459 aaPredicted RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 C12orf4Q9NQ89 552 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 AGPAT5Q9NUQ2 364 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 GPATCH2Q9NW75 528 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 MTMR10Q9NXD2 777 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 ZNF214Q9UL59 606 aaPredicted RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 PCDHA11Q9Y5I1 949 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 CST1P01037 141 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 GLI1P08151 1106 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 RRM1P23921 792 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 RAB5BP61020 215 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 NEDD8Q15843 81 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 FSCN1Q16658 493 aaKnown RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 CNPY1Q3B7I2 92 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 WDR59Q6PJI9 974 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 SPATA2LQ8IUW3 424 aaPredicted RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 DCP1BQ8IZD4 617 aaKnown RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 CDRT15Q96T59 188 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 CCDC32Q9BV29 185 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 SCGNO76038 276 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 NADKO95544 446 aaPredicted RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 GTF2E2P29084 291 aaKnown RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 STK32CQ86UX6 486 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 TMEM159Q96B96 161 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 GRIP1Q9Y3R0 1128 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 GMPPBQ9Y5P6 360 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 ATRNO75882 1429 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 OR6B1O95007 311 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 PTTG1O95997 202 aa8.09□□□□□ -1.11
HTT-201ENST00000355072 RPL4P36578 427 aaKnown RBP8.09□□□□□ -1.11
HTT-201ENST00000355072 GNG2P59768 71 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms