RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PTPN11Q06124 597 aaPredicted RBP15.52■□□□□ 0.08
LMNA-201ENST00000347559 SLC36A3Q495N2 470 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 CCDC14Q49A88 953 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 FAM160B2Q86V87 743 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 CCNYQ8ND76 341 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 OR52K1Q8NGK4 314 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 KCTD4Q8WVF5 259 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 HTR3CQ8WXA8 447 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 PDLIM7Q9NR12 457 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 POLE4Q9NR33 117 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 IFT80Q9P2H3 777 aaPredicted RBP15.52■□□□□ 0.08
LMNA-201ENST00000347559 TCAF1Q9Y4C2 921 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 PSMD11O00231 422 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 ELK4P28324 431 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 PTPN9P43378 593 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 CBLBQ13191 982 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 PPP1R3AQ16821 1122 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 ZIK1Q3SY52 487 aaPredicted RBP15.52■□□□□ 0.08
LMNA-201ENST00000347559 ABHD11Q8NFV4 315 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 CAPSLQ8WWF8 208 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 PDCD2LQ9BRP1 358 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 HGH1Q9BTY7 390 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 UTP6Q9NYH9 597 aaKnown RBP15.52■□□□□ 0.08
LMNA-201ENST00000347559 SCHIP1Q9P0W5 487 aaPredicted RBP15.52■□□□□ 0.08
LMNA-201ENST00000347559 VTI1BQ9UEU0 232 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 V9GYQ6 96 aa15.52■□□□□ 0.08
LMNA-201ENST00000347559 IQCA1LA6NCM1 817 aa15.52■□□□□ 0.07
LMNA-201ENST00000347559 H2AFYO75367 372 aaKnown RBP15.52■□□□□ 0.07
LMNA-201ENST00000347559 STBD1O95210 358 aa15.52■□□□□ 0.07
LMNA-201ENST00000347559 LRP8Q14114 963 aa15.52■□□□□ 0.07
LMNA-201ENST00000347559 FAM98CQ17RN3 349 aaKnown RBP15.52■□□□□ 0.07
LMNA-201ENST00000347559 TIGD2Q4W5G0 525 aa15.52■□□□□ 0.07
LMNA-201ENST00000347559 SAMD4BQ5PRF9 694 aaKnown RBP15.52■□□□□ 0.07
LMNA-201ENST00000347559 MCF2L2Q86YR7 1114 aa15.52■□□□□ 0.07
LMNA-201ENST00000347559 LSMEM2Q8N112 164 aa15.52■□□□□ 0.07
LMNA-201ENST00000347559 DNAAF3Q8N9W5 541 aa15.52■□□□□ 0.07
LMNA-201ENST00000347559 CXorf38Q8TB03 319 aa15.52■□□□□ 0.07
LMNA-201ENST00000347559 SNX19Q92543 992 aa15.52■□□□□ 0.07
LMNA-201ENST00000347559 SEPT8Q92599 483 aa15.52■□□□□ 0.07
LMNA-201ENST00000347559 VTA1Q9NP79 307 aa15.52■□□□□ 0.07
LMNA-201ENST00000347559 MORF4L1Q9UBU8 362 aa15.52■□□□□ 0.07
LMNA-201ENST00000347559 ADGRA2Q96PE1 1338 aa15.52■□□□□ 0.07
LMNA-201ENST00000347559 CLDN25C9JDP6 229 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 SDHDO14521 159 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 IL18RAPO95256 599 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 IL10P22301 178 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 SDC4P31431 198 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 GNL1P36915 607 aaPredicted RBP15.51■□□□□ 0.07
LMNA-201ENST00000347559 TRAP1Q12931 704 aaKnown RBP15.51■□□□□ 0.07
LMNA-201ENST00000347559 ZNF667Q5HYK9 610 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 C4orf22Q6V702 233 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 RPS27LQ71UM5 84 aaKnown RBP15.51■□□□□ 0.07
LMNA-201ENST00000347559 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.51■□□□□ 0.07
LMNA-201ENST00000347559 MFSD2AQ8NA29 543 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 PDZD8Q8NEN9 1154 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 UHRF1Q96T88 793 aaPredicted RBP15.51■□□□□ 0.07
LMNA-201ENST00000347559 TRIM8Q9BZR9 551 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 ADNPQ9H2P0 1102 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 PSME2Q9UL46 239 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 DHRS12A0PJE2 317 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 CLRN2A0PK11 232 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 FAM47E-STBD1D6RA91 191 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 SNAP29O95721 258 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 MPOP05164 745 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 PSAPP07602 524 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 FASP25445 335 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 ACTR2P61160 394 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 TMEM132AQ24JP5 1023 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 IL31Q6EBC2 164 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 ZYG11AQ6WRX3 759 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 IFNEQ86WN2 208 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 SPNS2Q8IVW8 549 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 MFSD3Q96ES6 412 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 MROQ9BYG7 248 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 ELOVL4Q9GZR5 314 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 SNX25Q9H3E2 840 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 FEM1BQ9UK73 627 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 TRAF6Q9Y4K3 522 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 SIPA1L1O43166 1804 aa15.51■□□□□ 0.07
LMNA-201ENST00000347559 A0A0A0MRY4 1105 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 RNF103O00237 685 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 GPD2P43304 727 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 ZNF460Q14592 562 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 USP10Q14694 798 aaKnown RBP15.5■□□□□ 0.07
LMNA-201ENST00000347559 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.5■□□□□ 0.072e-6■■■■■ 27.3
LMNA-201ENST00000347559 CERKQ8TCT0 537 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 TOP1MTQ969P6 601 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 CPB2Q96IY4 423 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 SPATA13Q96N96 652 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 CSF3RQ99062 836 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 APOL2Q9BQE5 337 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 TDRD1Q9BXT4 1180 aaKnown RBP15.5■□□□□ 0.07
LMNA-201ENST00000347559 DGCR6LQ9BY27 220 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 XYLT2Q9H1B5 865 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 IARS2Q9NSE4 1012 aaKnown RBP15.5■□□□□ 0.07
LMNA-201ENST00000347559 TMEM9Q9P0T7 183 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 B3GNT3Q9Y2A9 372 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 COL5A3P25940 1745 aaPredicted RBP15.5■□□□□ 0.07
LMNA-201ENST00000347559 ATP6AP2A0A1C7CYW4 349 aa15.5■□□□□ 0.07
LMNA-201ENST00000347559 C9JVG2 144 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms