RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 RFKQ969G6 155 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 HIPK3Q9H422 1215 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 UNKLQ9H9P5 680 aaKnown RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 TREM1Q9NP99 234 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 PCDH10Q9P2E7 1040 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 PCDHGB3Q9Y5G1 929 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 PNMA6FA0A0J9YX94 578 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 KRT33AO76009 404 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 HIBADHP31937 336 aaKnown RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 USP4Q13107 963 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 ARCQ7LC44 396 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 AMIGO2Q86SJ2 522 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 OR14K1Q8NGZ2 314 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 PUS3Q9BZE2 481 aaKnown RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 BIN3Q9NQY0 253 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 VANGL2Q9ULK5 521 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 PNMA8BQ9ULN7 279 aaPredicted RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 TGM6O95932 706 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 ERCC2P18074 760 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 DDX6P26196 483 aaKnown RBP eCLIP6.22□□□□□ -1.41
VCAN-203ENST00000343200 MATKP42679 507 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 PHKA2P46019 1235 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 C11orf63Q6NUN7 778 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 THNSL1Q8IYQ7 743 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 DBNDD2Q9BQY9 259 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 IFT46Q9NQC8 304 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 FER1L4A9Z1Z3 1794 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 H0Y858 1186 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 SLC30A4O14863 429 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 NUAK1O60285 661 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 CLPXO76031 633 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 NKX6-1P78426 367 aaPredicted RBP6.22□□□□□ -1.41
VCAN-203ENST00000343200 NR6A1Q15406 480 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 TAF13Q15543 124 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 CA9Q16790 459 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 PTPRNQ16849 979 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 SLC47A1Q96FL8 570 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 ADAM33Q9BZ11 813 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 KCTD10Q9H3F6 313 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 RGCCQ9H4X1 137 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 C19orf12Q9NSK7 152 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 FAM105AQ9NUU6 356 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 GPRC5DQ9NZD1 345 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 NUP98P52948 1817 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 WNK3Q9BYP7 1800 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 MAGEB2O15479 319 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 IDO1P14902 403 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 PON1P27169 355 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 MNDAP41218 407 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 PTGER2P43116 358 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 NR2C2P49116 596 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 FMO5P49326 533 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 THOP1P52888 689 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 PAPD7Q5XG87 772 aaKnown RBP6.22□□□□□ -1.41
VCAN-203ENST00000343200 KRT28Q7Z3Y7 464 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 COMTD1Q86VU5 262 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 POU5F2Q8N7G0 328 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 SSH3Q8TE77 659 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 BTBD9Q96Q07 612 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 CATSPERBQ9H7T0 1116 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 ANKRA2Q9H9E1 313 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 CD320Q9NPF0 282 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 PRDM8Q9NQV8 689 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 DPP3Q9NY33 737 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 PLK2Q9NYY3 685 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 ACTL7BQ9Y614 415 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 CEP170Q5SW79 1584 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 GABBR2O75899 941 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 ANXA9O76027 345 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 CHRNA5P30532 468 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 ATP2C1P98194 919 aaPredicted RBP6.22□□□□□ -1.41
VCAN-203ENST00000343200 DUOXA2Q1HG44 320 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 PPP1R18Q6NYC8 613 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 TATDN2Q93075 761 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 CHP1Q99653 195 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 LPIN3Q9BQK8 851 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 REEP2Q9BRK0 252 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 KCNE2Q9Y6J6 123 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 FRMPD3Q5JV73 1810 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 H6PDO95479 791 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 SLC2A2P11168 524 aaPredicted RBP6.22□□□□□ -1.41
VCAN-203ENST00000343200 CDKN2CP42773 168 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 RAB27AP51159 221 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 CTSWP56202 376 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 MFSD14BQ5SR56 506 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 MRNIPQ6NTE8 343 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 ERAP2Q6P179 960 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 ZNF467Q7Z7K2 595 aaPredicted RBP6.22□□□□□ -1.41
VCAN-203ENST00000343200 ZSCAN1Q8NBB4 408 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 REXO5Q96IC2 774 aaKnown RBP6.22□□□□□ -1.41
VCAN-203ENST00000343200 VCPIP1Q96JH7 1222 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 NUDT15Q9NV35 164 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 MFHAS1Q9Y4C4 1052 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 TRPV2Q9Y5S1 764 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 UNC13BO14795 1591 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 A0A1W2PP64 1363 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 SLC33A1O00400 549 aaPredicted RBP6.22□□□□□ -1.41
VCAN-203ENST00000343200 PCDHGA12O60330 932 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 IFNA17P01571 189 aa6.22□□□□□ -1.41
VCAN-203ENST00000343200 CRABP2P29373 138 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms