RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 HAUS2Q9NVX0 235 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 DENND4AQ7Z401 1863 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 A0A087WUV0 522 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 H3BQF6 201 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TPH1P17752 444 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 MTHFRP42898 656 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SKOR1P84550 965 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CDH17Q12864 832 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 FUT11Q495W5 492 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 INO80DQ53TQ3 878 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 HSP90B2PQ58FF3 399 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ALG1LQ6GMV1 187 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 VITQ6UXI7 678 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 GOLGA6L1Q8N7Z2 621 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TADA1Q96BN2 335 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SH3GL2Q99962 352 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TRIM56Q9BRZ2 755 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 VPS45Q9NRW7 570 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SYBUQ9NX95 663 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 BFARQ9NZS9 450 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ZC3H7BQ9UGR2 993 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 GGA2Q9UJY4 613 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 FCF1Q9Y324 198 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ANKRD36A6QL64 1941 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SMIM23A6NLE4 172 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 K7ERQ8 282 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TRIM24O15164 1050 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ADH1CP00326 375 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ADH5P11766 374 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 PABPC1P11940 636 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 PHBP35232 272 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CTSOP43234 321 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SCNN1BP51168 640 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 KRT71Q3SY84 523 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CERCAMQ5T4B2 595 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ZNF557Q8N988 423 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 STAMBPL1Q96FJ0 436 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 PLA2G2FQ9BZM2 168 aa14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 THG1LQ9NWX6 298 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-201ENST00000338399 KIF26AQ9ULI4 1882 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TLDC2A0PJX2 215 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SMAD6O43541 496 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ATP9BO43861 1147 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 NFATC1O95644 943 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SERPINF2P08697 491 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 LAMP2P13473 410 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TSHRP16473 764 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CR2P20023 1033 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 NPY2RP49146 381 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 GEMIN4P57678 1058 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 COL19A1Q14993 1142 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 LONRF1Q17RB8 773 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 DENND5AQ6IQ26 1287 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 RANBP10Q6VN20 620 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 MFSD6LQ8IWD5 586 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 EPS8L3Q8TE67 593 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 FBF1Q8TES7 1133 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ARL8AQ96BM9 186 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 LRCH3Q96II8 777 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 RPL10LQ96L21 214 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 KXD1Q9BQD3 176 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 FAM83CQ9BQN1 747 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SLC2A11Q9BYW1 496 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CENPHQ9H3R5 247 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 NOD2Q9HC29 1040 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 MED4Q9NPJ6 270 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SCUBE2Q9NQ36 999 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 LHX3Q9UBR4 397 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 MYLKQ15746 1914 aa14.94□□□□□ -0.02
CDK5RAP3-201ENST00000338399 GOLGA6L10A6NI86 522 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 AP3B1O00203 1094 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 INSIG1O15503 277 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 HOXC11O43248 304 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 MYZAPP0CAP1 466 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CHRNA4P43681 627 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SLCO1A2P46721 670 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SERPINH1P50454 418 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 RHOAP61586 193 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 GRM2Q14416 872 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 STAT4Q14765 748 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 PARM1Q6UWI2 310 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 UNC5AQ6ZN44 842 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SLC25A41Q8N5S1 370 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SMRP1Q8NCR6 262 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ATP2A3Q93084 1043 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 E2F7Q96AV8 911 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 NSMCE3Q96MG7 304 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 XPO6Q96QU8 1125 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 NUDCD1Q96RS6 583 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 GAS2L1Q99501 681 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CCDC77Q9BR77 488 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 PLAC1Q9HBJ0 212 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TMBIM4Q9HC24 238 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 RABGEF1Q9UJ41 708 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 FBXO10Q9UK96 956 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 BRWD1Q9NSI6 2320 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 OTOL1A6NHN0 477 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 RASGRF2O14827 1237 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 STK19P49842 368 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ADIPOR2Q86V24 386 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms