RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 OPTCQ9UBM4 332 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 IRAK3Q9Y616 596 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 CDC42BPGQ6DT37 1551 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 TRIM64CA6NLI5 447 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 AP2A2O94973 939 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 RPN2P04844 631 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 TNNI3P19429 210 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 MYL6P60660 151 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 ARF3P61204 181 aaPredicted RBP9.9□□□□□ -0.82
COL4A6-201ENST00000334504 ARF1P84077 181 aaKnown RBP9.9□□□□□ -0.82
COL4A6-201ENST00000334504 C6orf183Q5T699 404 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 C16orf86Q6ZW13 317 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 GALNT6Q8NCL4 622 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 REPS1Q96D71 796 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 KLQ9UEF7 1012 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 NUP50Q9UKX7 468 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 UBQLN1Q9UMX0 589 aaKnown RBP9.9□□□□□ -0.82
COL4A6-201ENST00000334504 PSMD13Q9UNM6 376 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 TBC1D30Q9Y2I9 924 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 EFCAB6Q5THR3 1501 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 PRR5-ARHGAP8B1AHC4 643 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 CCRL2O00421 344 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 DDX3YO15523 660 aaKnown RBP9.9□□□□□ -0.82
COL4A6-201ENST00000334504 GH1P01241 217 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 ENO2P09104 434 aaPredicted RBP9.9□□□□□ -0.82
COL4A6-201ENST00000334504 ZNF12P17014 697 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 RASA1P20936 1047 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 SDC2P34741 201 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 ARHGAP8P85298 464 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 GRSF1Q12849 480 aaKnown RBP eCLIP9.9□□□□□ -0.82
COL4A6-201ENST00000334504 MTAPQ13126 283 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 INTS11Q5TA45 600 aaKnown RBP9.9□□□□□ -0.82
COL4A6-201ENST00000334504 R3HCC1LQ7Z5L2 792 aaKnown RBP9.9□□□□□ -0.82
COL4A6-201ENST00000334504 GALNT5Q7Z7M9 940 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 CLPTM1LQ96KA5 538 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 RTKNQ9BST9 563 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 RHOCP08134 193 aa9.9□□□□□ -0.83
COL4A6-201ENST00000334504 RBL1P28749 1068 aa9.9□□□□□ -0.83
COL4A6-201ENST00000334504 NAGLUP54802 743 aa9.9□□□□□ -0.83
COL4A6-201ENST00000334504 CYP20A1Q6UW02 462 aa9.9□□□□□ -0.83
COL4A6-201ENST00000334504 PALB2Q86YC2 1186 aa9.9□□□□□ -0.83
COL4A6-201ENST00000334504 C12orf56Q8IXR9 622 aa9.9□□□□□ -0.83
COL4A6-201ENST00000334504 ADGRF2Q8IZF7 708 aa9.9□□□□□ -0.83
COL4A6-201ENST00000334504 POF1BQ8WVV4 589 aa9.9□□□□□ -0.83
COL4A6-201ENST00000334504 DIRAS2Q96HU8 199 aa9.9□□□□□ -0.83
COL4A6-201ENST00000334504 ATXN3LQ9H3M9 355 aa9.9□□□□□ -0.83
COL4A6-201ENST00000334504 EMC3Q9P0I2 261 aa9.9□□□□□ -0.83
COL4A6-201ENST00000334504 OR14I1A6ND48 311 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 FAM86B1E9PN63 330 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 GJB6O95452 261 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 NUDT14O95848 222 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 LTA4HP09960 611 aaKnown RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 SLC5A3P53794 718 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 USF2Q15853 346 aaPredicted RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 HYIQ5T013 277 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 HERC6Q8IVU3 1022 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 TBC1D21Q8IYX1 336 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 SLC34A3Q8N130 599 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 PHF10Q8WUB8 498 aaKnown RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 ART4Q93070 314 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 EMILIN2Q9BXX0 1053 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 C17orf75Q9HAS0 396 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 OVOS2A0A0G2JMS6 1433 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 UGT2B11O75310 529 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 ITGA2P17301 1181 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 TYMPP19971 482 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 ACAT1P24752 427 aaKnown RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 HIRAP54198 1017 aaPredicted RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 EFEMP1Q12805 493 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 KIAA0895Q8NCT3 520 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 TPK1Q9H3S4 243 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 PRAMEF33A0A0G2JMD5 474 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 CBX4O00257 560 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 AP3D1O14617 1153 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 PRAMEF10O60809 474 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 SIN3BO75182 1162 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 VCLP18206 1134 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 TSPAN8P19075 237 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 EPHA3P29320 983 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 FAUP35544 74 aaKnown RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 NR2C2P49116 596 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 CRADDP78560 199 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 CBFBQ13951 182 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 BOP1Q14137 746 aaKnown RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 LACTB2Q53H82 288 aaPredicted RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 ARCQ7LC44 396 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 PIGKQ92643 395 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 ISCA1Q9BUE6 129 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 MECRQ9BV79 373 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 STN1Q9H668 368 aaKnown RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 BLOC1S4Q9NUP1 217 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 GAKO14976 1311 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 HMGCRP04035 888 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 FESP07332 822 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 PRKAR2AP13861 404 aaKnown RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 NFKB1P19838 968 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 NPTX2P47972 431 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 PTPN20Q4JDL3 420 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 NELL1Q92832 810 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 CIB1Q99828 191 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms