RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 GRIA3P42263 894 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 HERC3Q15034 1050 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 PITRM1Q5JRX3 1037 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 OGFOD2Q6N063 350 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 ZYG11AQ6WRX3 759 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 KCNMB4Q86W47 210 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 FBXO16Q8IX29 292 aaPredicted RBP13.9□□□□□ -0.18
SYNE3-201ENST00000334258 USP33Q8TEY7 942 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 SPATC1LQ9H0A9 340 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 ARMC7Q9H6L4 198 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 PDGFCQ9NRA1 345 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 ACKR2O00590 384 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 DPYSL4O14531 572 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 SLC22A2O15244 555 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 NOL3O60936 208 aaKnown RBP13.89□□□□□ -0.19
SYNE3-201ENST00000334258 PFKMP08237 780 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 PHEXP78562 749 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 RELAQ04206 551 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 GRM3Q14832 879 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 CERCAMQ5T4B2 595 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 ELMSAN1Q6PJG2 1045 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 CHSY3Q70JA7 882 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 ZNF567Q8N184 647 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 CBR4Q8N4T8 237 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 TRPC4APQ8TEL6 797 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 BORCS5Q969J3 196 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 TUT1Q9H6E5 874 aaKnown RBP13.89□□□□□ -0.19
SYNE3-201ENST00000334258 IL1RL2Q9HB29 575 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 PCDHGA7Q9Y5G6 932 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 FAM149AA5PLN7 773 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 PRORSD1PA6NEY8 169 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 HSPA8P11142 646 aaKnown RBP13.89□□□□□ -0.19
SYNE3-201ENST00000334258 HNRNPLP14866 589 aaKnown RBP eCLIP13.89□□□□□ -0.192e-7■■■■□ 25.1
SYNE3-201ENST00000334258 RFTN1Q14699 578 aaPredicted RBP13.89□□□□□ -0.19
SYNE3-201ENST00000334258 IQCF2Q8IXL9 164 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 TMCO5AQ8N6Q1 288 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 PCYT2Q99447 389 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 UNC93B1Q9H1C4 597 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 C2orf40Q9H1Z8 148 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 HIPK3Q9H422 1215 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 CNOT6Q9ULM6 557 aaKnown RBP13.89□□□□□ -0.19
SYNE3-201ENST00000334258 HTR3EA5X5Y0 456 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 HACD1B0YJ81 288 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 SOCS2O14508 198 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 BMP10O95393 424 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 CLIC3O95833 236 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 SLC7A1P30825 629 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 SNX16P57768 344 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 CREB5Q02930 508 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 GSTM4Q03013 218 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 FASTKQ14296 549 aaKnown RBP13.89□□□□□ -0.19
SYNE3-201ENST00000334258 PRPSAP1Q14558 356 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 TARBP2Q15633 366 aaKnown RBP13.89□□□□□ -0.19
SYNE3-201ENST00000334258 C6orf183Q5T699 404 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 TTC30AQ86WT1 665 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 DHFR2Q86XF0 187 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 CXorf38Q8TB03 319 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 CANT1Q8WVQ1 401 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 KHSRPQ92945 711 aaKnown RBP eCLIP13.89□□□□□ -0.19
SYNE3-201ENST00000334258 SLC39A3Q9BRY0 314 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 POLR1BQ9H9Y6 1135 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 SPAG4Q9NPE6 437 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 CHRAC1Q9NRG0 131 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 XPR1Q9UBH6 696 aa13.89□□□□□ -0.19
SYNE3-201ENST00000334258 SUCOQ9UBS9 1254 aaKnown RBP13.89□□□□□ -0.19
SYNE3-201ENST00000334258 H0YJX3 145 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 SPTLC1O15269 473 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 ATE1O95260 518 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 ARSAP15289 507 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 UGT1A6P19224 532 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 UGT1A1P22309 533 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 UGT1A4P22310 534 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 UBA1P22314 1058 aaKnown RBP13.88□□□□□ -0.19
SYNE3-201ENST00000334258 UGT1A3P35503 534 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 UGT1A5P35504 534 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 GJA5P36382 358 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 PRKCQQ04759 706 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 BNIP3Q12983 259 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 ANO4Q32M45 955 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 THOC7Q6I9Y2 204 aaKnown RBP13.88□□□□□ -0.19
SYNE3-201ENST00000334258 FSTL5Q8N475 847 aaPredicted RBP13.88□□□□□ -0.19
SYNE3-201ENST00000334258 PLEKHA8Q96JA3 519 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 ANKRD60Q9BZ19 345 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 EIF2B3Q9NR50 452 aaKnown RBP13.88□□□□□ -0.19
SYNE3-201ENST00000334258 UBP1Q9NZI7 540 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 SFMBT1Q9UHJ3 866 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 SOWAHBA6NEL2 793 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 TRPC5OSA6NMA1 111 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 J3QRK9 145 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 ARIH2O95376 493 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 ADORA2BP29275 332 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 ZNF460Q14592 562 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 NEDD8Q15843 81 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 FGD3Q5JSP0 725 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 SDR16C5Q8N3Y7 309 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 FBXL8Q96CD0 374 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 LPIN3Q9BQK8 851 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 TMPRSS4Q9NRS4 437 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 ZNHIT2Q9UHR6 403 aa13.88□□□□□ -0.19
SYNE3-201ENST00000334258 MRASO14807 208 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms