RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 MORF4L1Q9UBU8 362 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 DNMT3LQ9UJW3 386 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 CLUHO75153 1309 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 NEMP2A6NFY4 417 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 UBDO15205 165 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 CCNT2O60583 730 aaKnown RBP11.97□□□□□ -0.49
DDR1-223ENST00000324771 GABRR2P28476 465 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 ZNF132P52740 706 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 ABCE1P61221 599 aaKnown RBP11.97□□□□□ -0.49
DDR1-223ENST00000324771 KLF1Q13351 362 aaPredicted RBP11.97□□□□□ -0.49
DDR1-223ENST00000324771 XRCC4Q13426 336 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 SIX1Q15475 284 aaPredicted RBP11.97□□□□□ -0.49
DDR1-223ENST00000324771 DPYSL2Q16555 572 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 AGMOQ6ZNB7 445 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 GPRIN1Q7Z2K8 1008 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 ZNF333Q96JL9 665 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 THUMPD3Q9BV44 507 aaKnown RBP11.97□□□□□ -0.49
DDR1-223ENST00000324771 ADGRE3Q9BY15 652 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 BRD8Q9H0E9 1235 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 HPS4Q9NQG7 708 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 PKD2L2Q9NZM6 624 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 PLLPQ9Y342 182 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 LRP5O75197 1615 aa11.97□□□□□ -0.49
DDR1-223ENST00000324771 KPNA3O00505 521 aaPredicted RBP11.96□□□□□ -0.49
DDR1-223ENST00000324771 FKTNO75072 461 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 RPLP2P05387 115 aaKnown RBP11.96□□□□□ -0.49
DDR1-223ENST00000324771 APOA4P06727 396 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 RBP1P09455 135 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 USP41Q3LFD5 358 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 KYAT3Q6YP21 454 aaKnown RBP11.96□□□□□ -0.49
DDR1-223ENST00000324771 TRPC4APQ8TEL6 797 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 NAT14Q8WUY8 206 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 NXNL1Q96CM4 212 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 IGFLR1Q9H665 355 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 EFCAB1Q9HAE3 211 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 FBXW11Q9UKB1 542 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 BTRCQ9Y297 605 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 ZBTB42B2RXF5 422 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 FGF10O15520 208 aaPredicted RBP11.96□□□□□ -0.49
DDR1-223ENST00000324771 SELPP16109 830 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 WARSP23381 471 aaKnown RBP11.96□□□□□ -0.49
DDR1-223ENST00000324771 MPSTP25325 297 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 HSPA14Q0VDF9 509 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 MAP7Q14244 749 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 C11orf96Q7Z7L8 435 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 EGFL6Q8IUX8 553 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 FBXO39Q8N4B4 442 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 NIPA2Q8N8Q9 360 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 HMCESQ96FZ2 354 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 ZNF558Q96NG5 402 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 MRPL9Q9BYD2 267 aaKnown RBP11.96□□□□□ -0.49
DDR1-223ENST00000324771 CERS4Q9HA82 394 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 PGAP2Q9UHJ9 254 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 SNX13Q9Y5W8 968 aa11.96□□□□□ -0.49
DDR1-223ENST00000324771 HNRNPCL1O60812 293 aaKnown RBP11.96□□□□□ -0.5
DDR1-223ENST00000324771 PEX11AO75192 247 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 KRT36O76013 467 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 THRAP10827 490 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 CDK18Q07002 472 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 PRKAA1Q13131 559 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 MED21Q13503 144 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 NR6A1Q15406 480 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 RARS2Q5T160 578 aaKnown RBP11.96□□□□□ -0.5
DDR1-223ENST00000324771 SNX30Q5VWJ9 437 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 LRRC8BQ6P9F7 803 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 TTC23LQ6PF05 361 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 ARHGAP36Q6ZRI8 547 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 ANKS3Q6ZW76 656 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 RASAL3Q86YV0 1011 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 YAF2Q8IY57 180 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 MTFMTQ96DP5 389 aaKnown RBP11.96□□□□□ -0.5
DDR1-223ENST00000324771 RPL10LQ96L21 214 aaKnown RBP11.96□□□□□ -0.5
DDR1-223ENST00000324771 FTHL17Q9BXU8 183 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 ING2Q9H160 280 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 ADAMTS10Q9H324 1103 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 VCX3AQ9NNX9 186 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 CNTN3Q9P232 1028 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 A0A0U1RQF3 1178 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 EME2A4GXA9 379 aaPredicted RBP11.96□□□□□ -0.5
DDR1-223ENST00000324771 PFDN1O60925 122 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 ITGALP20701 1170 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 KCNQ1P51787 676 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 KLC1Q07866 573 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 INCA1Q0VD86 236 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 PTK2BQ14289 1009 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 MAPRE2Q15555 327 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 LRRC73Q5JTD7 316 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 FSTL4Q6MZW2 842 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 ZNF467Q7Z7K2 595 aaPredicted RBP11.96□□□□□ -0.5
DDR1-223ENST00000324771 PTGR2Q8N8N7 351 aaPredicted RBP11.96□□□□□ -0.5
DDR1-223ENST00000324771 SMG8Q8ND04 991 aaKnown RBP11.96□□□□□ -0.5
DDR1-223ENST00000324771 MS4A4AQ96JQ5 239 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 TAS2R13Q9NYV9 303 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 SOX13Q9UN79 622 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 EVPLQ92817 2033 aa11.96□□□□□ -0.5
DDR1-223ENST00000324771 C5orf60A6NFR6 353 aa11.95□□□□□ -0.5
DDR1-223ENST00000324771 TRPC5OSA6NMA1 111 aa11.95□□□□□ -0.5
DDR1-223ENST00000324771 PRPF4O43172 522 aaKnown RBP eCLIP11.95□□□□□ -0.52e-6■■■■□ 22.5
DDR1-223ENST00000324771 MPOP05164 745 aa11.95□□□□□ -0.5
DDR1-223ENST00000324771 ITGB1P05556 798 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms