RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 ZNF701M0R085 212 aaPredicted RBP18.1■□□□□ 0.49
PRKCB-202ENST00000321728 ZBTB11O95625 1053 aaPredicted RBP18.1■□□□□ 0.49
PRKCB-202ENST00000321728 PSMD8P48556 350 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 RBP5P82980 135 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 OGFOD2Q6N063 350 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 LYSMD3Q7Z3D4 306 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 TNIP2Q8NFZ5 429 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 FAM167AQ96KS9 214 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 TCF12Q99081 682 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 MRPL45Q9BRJ2 306 aaKnown RBP18.1■□□□□ 0.49
PRKCB-202ENST00000321728 C11orf84Q9BUA3 381 aaPredicted RBP18.1■□□□□ 0.49
PRKCB-202ENST00000321728 DPP3Q9NY33 737 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 H3BMQ9 156 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 FBP2O00757 339 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 HNRNPLP14866 589 aaKnown RBP eCLIP18.09■□□□□ 0.493e-7■■■□□ 19.2
PRKCB-202ENST00000321728 CLCN3P51790 818 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 MBTD1Q05BQ5 628 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 ATP1A4Q13733 1029 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 ZNF460Q14592 562 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 MAPRE2Q15555 327 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 MAP7D1Q3KQU3 841 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 PITRM1Q5JRX3 1037 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 ZDHHC17Q8IUH5 632 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 ANKFN1Q8N957 763 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 ZNF280CQ8ND82 737 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 COG8Q96MW5 612 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 UHRF1Q96T88 793 aaPredicted RBP18.09■□□□□ 0.49
PRKCB-202ENST00000321728 RPF2Q9H7B2 306 aaKnown RBP18.09■□□□□ 0.49
PRKCB-202ENST00000321728 SFMBT1Q9UHJ3 866 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 GTF2IRD1Q9UHL9 959 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 CDH7Q9ULB5 785 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 FUOMA2VDF0 154 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 TRIM43BA6NCK2 446 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 AP2A1O95782 977 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 COL6A2P12110 1019 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 UGT1A6P19224 532 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 UGT1A1P22309 533 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 UGT1A4P22310 534 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 UGT1A3P35503 534 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 UGT1A5P35504 534 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 SLC12A1Q13621 1099 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 SLC10A6Q3KNW5 377 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 HSDL1Q3SXM5 330 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 FGD3Q5JSP0 725 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 C6orf10Q5SRN2 563 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 ZBTB46Q86UZ6 589 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 SLC41A1Q8IVJ1 513 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 ANKRD52Q8NB46 1076 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 RNF169Q8NCN4 708 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 RNF139Q8WU17 664 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 GPR22Q99680 433 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 SLC39A3Q9BRY0 314 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 NPLQ9BXD5 320 aaPredicted RBP18.09■□□□□ 0.49
PRKCB-202ENST00000321728 DNAI2Q9GZS0 605 aa18.09■□□□□ 0.49
PRKCB-202ENST00000321728 FAM149AA5PLN7 773 aa18.08■□□□□ 0.49
PRKCB-202ENST00000321728 MRASO14807 208 aa18.08■□□□□ 0.49
PRKCB-202ENST00000321728 SLC35E2BP0CK96 405 aa18.08■□□□□ 0.49
PRKCB-202ENST00000321728 ACADVLP49748 655 aa18.08■□□□□ 0.49
PRKCB-202ENST00000321728 PMS2P3Q13401 168 aa18.08■□□□□ 0.49
PRKCB-202ENST00000321728 SAMD4BQ5PRF9 694 aaKnown RBP18.08■□□□□ 0.49
PRKCB-202ENST00000321728 DCDC5Q6ZRR9 648 aa18.08■□□□□ 0.49
PRKCB-202ENST00000321728 SLC26A9Q7LBE3 791 aa18.08■□□□□ 0.49
PRKCB-202ENST00000321728 TTC39CQ8N584 583 aa18.08■□□□□ 0.49
PRKCB-202ENST00000321728 CPB2Q96IY4 423 aa18.08■□□□□ 0.49
PRKCB-202ENST00000321728 ADI1Q9BV57 179 aa18.08■□□□□ 0.49
PRKCB-202ENST00000321728 ASB7Q9H672 318 aa18.08■□□□□ 0.49
PRKCB-202ENST00000321728 GMPR2Q9P2T1 348 aaKnown RBP18.08■□□□□ 0.49
PRKCB-202ENST00000321728 PTBP2Q9UKA9 531 aaKnown RBP18.08■□□□□ 0.49
PRKCB-202ENST00000321728 RNF103-CHMP3A0A140T963 221 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 ZBTB42B2RXF5 422 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 UBDO15205 165 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 GAS2O43903 313 aaKnown RBP18.08■□□□□ 0.48
PRKCB-202ENST00000321728 TPST1O60507 370 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 GPC4O75487 556 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 SERPINB7O75635 380 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 SRP72O76094 671 aaKnown RBP18.08■□□□□ 0.48
PRKCB-202ENST00000321728 HSPA8P11142 646 aaKnown RBP18.08■□□□□ 0.48
PRKCB-202ENST00000321728 BMP2P12643 396 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 ZNF12P17014 697 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 PTPRAP18433 802 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 NME5P56597 212 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 IGBP1P78318 339 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 ZC3HC1Q86WB0 502 aaKnown RBP18.08■□□□□ 0.48
PRKCB-202ENST00000321728 CAMK1DQ8IU85 385 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 CENPLQ8N0S6 344 aaPredicted RBP18.08■□□□□ 0.48
PRKCB-202ENST00000321728 PELI3Q8N2H9 469 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 HMGCLL1Q8TB92 370 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 TBC1D15Q8TC07 691 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 AFG1LQ8WV93 481 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 CYGBQ8WWM9 190 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 ZBED3Q96IU2 234 aaPredicted RBP18.08■□□□□ 0.48
PRKCB-202ENST00000321728 MAELQ96JY0 434 aaKnown RBP18.08■□□□□ 0.48
PRKCB-202ENST00000321728 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.08■□□□□ 0.487e-6■■□□□ 11.6
PRKCB-202ENST00000321728 NCKIPSDQ9NZQ3 722 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 CROTQ9UKG9 612 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 FZD10Q9ULW2 581 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 ACOT9Q9Y305 439 aa18.08■□□□□ 0.48
PRKCB-202ENST00000321728 CLIC3O95833 236 aa18.07■□□□□ 0.48
PRKCB-202ENST00000321728 CD247P20963 164 aa18.07■□□□□ 0.48
PRKCB-202ENST00000321728 NMBRP28336 390 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms