RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 PLIN3O60664 434 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 CLDN11O75508 207 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 STC2O76061 302 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 GNA12Q03113 381 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 TWF1Q12792 350 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 BNIP1Q12981 228 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 THOC5Q13769 683 aaKnown RBP17.2■□□□□ 0.34
SSR4-201ENST00000320857 SEPT6Q14141 434 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 CCDC153Q494R4 210 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 KIAA0930Q6ICG6 404 aaPredicted RBP17.2■□□□□ 0.34
SSR4-201ENST00000320857 CHST9Q7L1S5 443 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 OTOP2Q7RTS6 562 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 TCEAL8Q8IYN2 117 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 SLC25A41Q8N5S1 370 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 GABPB2Q8TAK5 448 aaPredicted RBP17.2■□□□□ 0.34
SSR4-201ENST00000320857 BADQ92934 168 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 TADA1Q96BN2 335 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 VPS39Q96JC1 886 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 LRRC37BQ96QE4 947 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 MCMBPQ9BTE3 642 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 MECRQ9BV79 373 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 POLR1EQ9GZS1 481 aaKnown RBP17.2■□□□□ 0.34
SSR4-201ENST00000320857 ATXN3LQ9H3M9 355 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 RHOJQ9H4E5 214 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 TREX1Q9NSU2 369 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 MTO1Q9Y2Z2 717 aaKnown RBP17.2■□□□□ 0.34
SSR4-201ENST00000320857 KIAA1671Q9BY89 1806 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 CCDC78A2IDD5 438 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 SIN3BO75182 1162 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 VAPBO95292 243 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 MMP2P08253 660 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 ETFBP38117 255 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 POLD2P49005 469 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 BST1Q10588 318 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 OVGP1Q12889 678 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 ESRP1Q6NXG1 681 aaKnown RBP17.2■□□□□ 0.34
SSR4-201ENST00000320857 C16orf46Q6P387 395 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 C16orf59Q7L2K0 433 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 NLRP9Q7RTR0 991 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 KDELC2Q7Z4H8 507 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 DNAJB7Q7Z6W7 309 aaPredicted RBP17.2■□□□□ 0.34
SSR4-201ENST00000320857 ITIH5Q86UX2 942 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 PGBD5Q8N414 524 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 PPP1R14CQ8TAE6 165 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 ARRDC2Q8TBH0 407 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 ATXN7L3BQ96GX2 97 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 GPR22Q99680 433 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 FAM167BQ9BTA0 163 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 KLF16Q9BXK1 252 aaPredicted RBP17.2■□□□□ 0.34
SSR4-201ENST00000320857 PDFQ9HBH1 243 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 EMCNQ9ULC0 261 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 INSL5Q9Y5Q6 135 aa17.2■□□□□ 0.34
SSR4-201ENST00000320857 PAPSS2O95340 614 aaPredicted RBP17.19■□□□□ 0.34
SSR4-201ENST00000320857 PROCP04070 461 aa17.19■□□□□ 0.34
SSR4-201ENST00000320857 CHRNA4P43681 627 aa17.19■□□□□ 0.34
SSR4-201ENST00000320857 ARCN1P48444 511 aaKnown RBP17.19■□□□□ 0.34
SSR4-201ENST00000320857 RGS19P49795 217 aa17.19■□□□□ 0.34
SSR4-201ENST00000320857 STX3Q13277 289 aa17.19■□□□□ 0.34
SSR4-201ENST00000320857 PPIGQ13427 754 aaKnown RBP eCLIP17.19■□□□□ 0.347e-9■□□□□ 8.7
SSR4-201ENST00000320857 FASTKD1Q53R41 847 aaKnown RBP17.19■□□□□ 0.34
SSR4-201ENST00000320857 PPM1JQ5JR12 505 aa17.19■□□□□ 0.34
SSR4-201ENST00000320857 ADGRF1Q5T601 910 aa17.19■□□□□ 0.34
SSR4-201ENST00000320857 IL31Q6EBC2 164 aa17.19■□□□□ 0.34
SSR4-201ENST00000320857 CMC1Q7Z7K0 106 aa17.19■□□□□ 0.34
SSR4-201ENST00000320857 HERC6Q8IVU3 1022 aa17.19■□□□□ 0.34
SSR4-201ENST00000320857 RFWD2Q8NHY2 731 aa17.19■□□□□ 0.34
SSR4-201ENST00000320857 ECT2Q9H8V3 914 aa17.19■□□□□ 0.34
SSR4-201ENST00000320857 SSX2IPQ9Y2D8 614 aa17.19■□□□□ 0.34
SSR4-201ENST00000320857 ANKRD6Q9Y2G4 727 aa17.19■□□□□ 0.34
SSR4-201ENST00000320857 PCDHB12Q9Y5F1 795 aa17.19■□□□□ 0.34
SSR4-201ENST00000320857 A0A096LPK6 155 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.18■□□□□ 0.34
SSR4-201ENST00000320857 CCDC195A0A1B0GUA6 201 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 ILVBLA1L0T0 632 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 CFAP73A6NFT4 308 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 H3BNC9 293 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 GOLGA8TH3BQL2 631 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 LATS1O95835 1130 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 TOP3BO95985 862 aaKnown RBP17.18■□□□□ 0.34
SSR4-201ENST00000320857 FGBP02675 491 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 KLKB1P03952 638 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 RHOCP08134 193 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 ARFIP2P53365 341 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 OXCT1P55809 520 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 IRX4P78413 519 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 HTRA4P83105 476 aaPredicted RBP17.18■□□□□ 0.34
SSR4-201ENST00000320857 ZNF177Q13360 481 aaPredicted RBP17.18■□□□□ 0.34
SSR4-201ENST00000320857 LAMB3Q13751 1172 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 CNGA3Q16281 694 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 SPDYAQ5MJ70 313 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 TSTD2Q5T7W7 516 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 SETD3Q86TU7 594 aaPredicted RBP17.18■□□□□ 0.34
SSR4-201ENST00000320857 ZC3HC1Q86WB0 502 aaKnown RBP17.18■□□□□ 0.34
SSR4-201ENST00000320857 CALML6Q8TD86 181 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 FEM1CQ96JP0 617 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 SEMA3CQ99985 751 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 MYLK2Q9H1R3 596 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 GKN1Q9NS71 199 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 SEPT3Q9UH03 358 aa17.18■□□□□ 0.34
SSR4-201ENST00000320857 DCTN4Q9UJW0 460 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms