RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 NCBP2-AS2Q69YL0 99 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 FBXL22Q6P050 247 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 USP30Q70CQ3 517 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 MAATS1Q7Z4T9 603 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 RABEPKQ7Z6M1 372 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 LINC00523Q86TU6 105 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 RBM23Q86U06 439 aaKnown RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 DNAAF5Q86Y56 855 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 LMNTD2Q8IXW0 634 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 CCDC13Q8IYE1 715 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 LGI2Q8N0V4 545 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 MMGT1Q8N4V1 131 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 ATPAF2Q8N5M1 289 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 TERB1Q8NA31 727 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 P3H4Q92791 437 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 LRRC39Q96DD0 335 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 ALG14Q96F25 216 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 SGSM3Q96HU1 749 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PPP1R16AQ96I34 528 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PRICKLE1Q96MT3 831 aaPredicted RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PEBP4Q96S96 227 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 P2RY13Q9BPV8 354 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 KLC2Q9H0B6 622 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 RAB17Q9H0T7 212 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 TRABDQ9H4I3 376 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 DHX35Q9H5Z1 703 aaKnown RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 BRD9Q9H8M2 597 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PCDH9Q9HC56 1237 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 ACP6Q9NPH0 428 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 HPS4Q9NQG7 708 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 HCFC1R1Q9NWW0 138 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 HACD3Q9P035 362 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PAK5Q9P286 719 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 DEC1Q9P2X7 70 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 GGA2Q9UJY4 613 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 FZD4Q9ULV1 537 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 ATP8A1Q9Y2Q0 1164 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 AAR2Q9Y312 384 aaKnown RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 CCDC189A1A4V9 331 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 TMCO5BA8MYB1 307 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 C10orf142B7Z368 130 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 F8W8V4 182 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PI4K2BG5E9Z4 385 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 DAPK3O43293 454 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 RNGTTO60942 597 aaKnown RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 POLR2EP19388 210 aaKnown RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 KCNA5P22460 613 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 GRNP28799 593 aaKnown RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 NRLP54845 237 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 SNRPD1P62314 119 aaKnown RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 SARNPP82979 210 aaKnown RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 ZXDAP98168 799 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 NME3Q13232 169 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 CDH18Q13634 790 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PTK6Q13882 451 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PRPSAP1Q14558 356 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PDPK2PQ6A1A2 396 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 SDE2Q6IQ49 451 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 CXorf57Q6NSI4 855 aaKnown RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 NLRP9Q7RTR0 991 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 MFN1Q8IWA4 741 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 SLC35F6Q8N357 371 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 SLC44A3Q8N4M1 653 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 CCDC185Q8N715 623 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 CCDC89Q8N998 374 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 TTC16Q8NEE8 873 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 ATL2Q8NHH9 583 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 TFB1MQ8WVM0 346 aaKnown RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 WFDC12Q8WWY7 111 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 EDAQ92838 391 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 TCEAL4Q96EI5 215 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 TBATAQ96M53 351 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 RPRD1AQ96P16 312 aaPredicted RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PSKH2Q96QS6 385 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 NUDCD1Q96RS6 583 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 RANBP9Q96S59 729 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 MGME1Q9BQP7 344 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 NAT9Q9BTE0 207 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 SEMA4AQ9H3S1 761 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 CERS4Q9HA82 394 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 KCNK12Q9HB15 430 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 CWC15Q9P013 229 aaKnown RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 CHORDC1Q9UHD1 332 aaPredicted RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 MRFAP1Q9Y605 127 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 NUMBLQ9Y6R0 609 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 SPECC1L-ADORA2AF8WAN1 911 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 H0Y858 1186 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 ZMPSTE24O75844 475 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 ALDH1A2O94788 518 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 SUN1O94901 812 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PRAMEF12O95522 483 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 IGSF6O95976 241 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 PRNPP04156 253 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 DLDP09622 509 aaKnown RBP3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 ERCC2P18074 760 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 IL1R2P27930 398 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 EPHB2P29323 1055 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 HOXD12P35452 270 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 ACTN2P35609 894 aa3.35□□□□□ -1.87
SCAMP1-201ENST00000320280 SERPINH1P50454 418 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms