RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 TFAP2CQ92754 450 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 EID2BQ96D98 161 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 NUDCD1Q96RS6 583 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 BRINP2Q9C0B6 783 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 NSRP1Q9H0G5 558 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 SMARCAD1Q9H4L7 1026 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 IL1RAPL1Q9NZN1 696 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 AGO1Q9UL18 857 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 RIMKLBQ9ULI2 386 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 CHRNA1P02708 482 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 CLTBP09497 229 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 PTPN1P18031 435 aaKnown RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 POLR2IP36954 125 aaKnown RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 SLC1A6P48664 564 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 THOP1P52888 689 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 TNFAIP2Q03169 654 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 KCTD2Q14681 263 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 GOLGA7BQ2TAP0 167 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 ANKRD20A4Q4UJ75 823 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 SPANXN3Q5MJ09 141 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 GDF6Q6KF10 455 aaPredicted RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 RFX8Q6ZV50 586 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 MFN1Q8IWA4 741 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 DCLK2Q8N568 766 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 ANKRD42Q8N9B4 389 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 PYROXD1Q8WU10 500 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 ANKRD49Q8WVL7 239 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 GAB3Q8WWW8 586 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 CERS2Q96G23 380 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 ZNF512Q96ME7 567 aaPredicted RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 RAB3IPQ96QF0 476 aaPredicted RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 CPNE1Q99829 537 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 CARS2Q9HA77 564 aaKnown RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 SUCOQ9UBS9 1254 aaKnown RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 SNX9Q9Y5X1 595 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 TLDC2A0PJX2 215 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 YJEFN3A6XGL0 299 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 NPHS1O60500 1241 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 CDK4P11802 303 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 KRT15P19012 456 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 PCMT1P22061 227 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 ADARB1P78563 741 aaKnown RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 BST2Q10589 180 aaKnown RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 KLF10Q13118 480 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 RNF187Q5TA31 235 aaPredicted RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 THEMIS2Q5TEJ8 643 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 AFTPHQ6ULP2 937 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 TSEN54Q7Z6J9 526 aaKnown RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 EXOC8Q8IYI6 725 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 AHI1Q8N157 1196 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 GOLM1Q8NBJ4 401 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 E2F7Q96AV8 911 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 TBC1D20Q96BZ9 403 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 FCRL5Q96RD9 977 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 ATOH8Q96SQ7 321 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 OMDQ99983 421 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 GATA5Q9BWX5 397 aaPredicted RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 AGPAT4Q9NRZ5 378 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 GMPR2Q9P2T1 348 aaKnown RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 DOCK6Q96HP0 2047 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 PRORSD1PA6NEY8 169 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 GOLGA8RI6L899 631 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 MED7O43513 233 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 RECQL4O94761 1208 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 PRLP01236 227 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 SERPINE1P05121 402 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 HARSP12081 509 aaKnown RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 CA4P22748 312 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 PEX6Q13608 980 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 ADGRE1Q14246 886 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 MYLK3Q32MK0 819 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 LIN52Q52LA3 116 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 DCAF6Q58WW2 860 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 CDR2LQ86X02 465 aaPredicted RBP7.94□□□□□ -1.14
CNOT4-201ENST00000315544 SCUBE1Q8IWY4 988 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 ZFP28Q8NHY6 868 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 C1orf74Q96LT6 269 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 CSF3RQ99062 836 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 PAAF1Q9BRP4 392 aa7.94□□□□□ -1.14
CNOT4-201ENST00000315544 PIKFYVEQ9Y2I7 2098 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 C10orf142B7Z368 130 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 OR6B1O95007 311 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 VCLP18206 1134 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 CDH2P19022 906 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 EPORP19235 508 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 TNNI1P19237 187 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 AQP5P55064 265 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 PCDH1Q08174 1060 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 PPP1R3AQ16821 1122 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 LSM12Q3MHD2 195 aaKnown RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 PARP15Q460N3 678 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 TRIM60Q495X7 471 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 GRTP1Q5TC63 336 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 KANK2Q63ZY3 851 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 ZCCHC23Q6ZST2 131 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 FAM217AQ8IXS0 508 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 DRAXINQ8NBI3 349 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 OR52K2Q8NGK3 314 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 MFSD3Q96ES6 412 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 IFT74Q96LB3 600 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms