RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 CCL22O00626 93 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 ETS2P15036 469 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 GRIA2P42262 883 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 ALDH1A3P47895 512 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 CSRP3P50461 194 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 PLK1P53350 603 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 CEACAM7Q14002 265 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 METTL21CQ5VZV1 264 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 IL31Q6EBC2 164 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 ZNF470Q6ECI4 717 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 AGMOQ6ZNB7 445 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 ACAD11Q709F0 780 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 TXNDC5Q8NBS9 432 aaKnown RBP25.66■■□□□ 1.7
HOXB3-201ENST00000311626 GPR78Q96P69 363 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 GLOD4Q9HC38 313 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 GTSE1Q9NYZ3 720 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 CDH9Q9ULB4 789 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 NEU3Q9UQ49 428 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 CDYLQ9Y232 598 aa25.66■■□□□ 1.7
HOXB3-201ENST00000311626 TARM1B6A8C7 271 aa25.65■■□□□ 1.7
HOXB3-201ENST00000311626 HLA-DQB2P05538 268 aa25.65■■□□□ 1.7
HOXB3-201ENST00000311626 INTS6LQ5JSJ4 861 aaKnown RBP25.65■■□□□ 1.7
HOXB3-201ENST00000311626 SH2D4BQ5SQS7 431 aa25.65■■□□□ 1.7
HOXB3-201ENST00000311626 RASIP1Q5U651 963 aa25.65■■□□□ 1.7
HOXB3-201ENST00000311626 CNSTQ6PJW8 725 aa25.65■■□□□ 1.7
HOXB3-201ENST00000311626 ANKRD23Q86SG2 305 aa25.65■■□□□ 1.7
HOXB3-201ENST00000311626 HEXDCQ8WVB3 486 aa25.65■■□□□ 1.7
HOXB3-201ENST00000311626 VAT1Q99536 393 aa25.65■■□□□ 1.7
HOXB3-201ENST00000311626 BRD8Q9H0E9 1235 aa25.65■■□□□ 1.7
HOXB3-201ENST00000311626 TNFRSF12AQ9NP84 129 aa25.65■■□□□ 1.7
HOXB3-201ENST00000311626 MTF2Q9Y483 593 aaPredicted RBP25.65■■□□□ 1.7
HOXB3-201ENST00000311626 B3GAT3O94766 335 aa25.65■■□□□ 1.7
HOXB3-201ENST00000311626 ARCN1P48444 511 aaKnown RBP25.65■■□□□ 1.7
HOXB3-201ENST00000311626 RAB10P61026 200 aa25.65■■□□□ 1.7
HOXB3-201ENST00000311626 PRKAA1Q13131 559 aa25.65■■□□□ 1.7
HOXB3-201ENST00000311626 FRG1Q14331 258 aaKnown RBP25.65■■□□□ 1.7
HOXB3-201ENST00000311626 AP5M1Q9H0R1 490 aa25.65■■□□□ 1.7
HOXB3-201ENST00000311626 RBM22Q9NW64 420 aaKnown RBP eCLIP25.65■■□□□ 1.7
HOXB3-201ENST00000311626 PAGE1O75459 146 aa25.64■■□□□ 1.7
HOXB3-201ENST00000311626 STMN1P16949 149 aa25.64■■□□□ 1.7
HOXB3-201ENST00000311626 KCNA5P22460 613 aa25.64■■□□□ 1.7
HOXB3-201ENST00000311626 PPARGP37231 505 aaPredicted RBP25.64■■□□□ 1.7
HOXB3-201ENST00000311626 FOLH1Q04609 750 aa25.64■■□□□ 1.7
HOXB3-201ENST00000311626 CSHL1Q14406 222 aa25.64■■□□□ 1.7
HOXB3-201ENST00000311626 FAM110CQ1W6H9 321 aa25.64■■□□□ 1.7
HOXB3-201ENST00000311626 COPS7BQ9H9Q2 264 aaPredicted RBP25.64■■□□□ 1.7
HOXB3-201ENST00000311626 ANKRD6Q9Y2G4 727 aa25.64■■□□□ 1.7
HOXB3-201ENST00000311626 COPG1Q9Y678 874 aaKnown RBP25.64■■□□□ 1.7
HOXB3-201ENST00000311626 MAFKO60675 156 aa25.64■■□□□ 1.69
HOXB3-201ENST00000311626 HDCP19113 662 aa25.64■■□□□ 1.69
HOXB3-201ENST00000311626 CACNB2Q08289 660 aaPredicted RBP25.64■■□□□ 1.69
HOXB3-201ENST00000311626 NSUN2Q08J23 767 aaKnown RBP eCLIP25.64■■□□□ 1.69
HOXB3-201ENST00000311626 FLOT2Q14254 428 aa25.64■■□□□ 1.69
HOXB3-201ENST00000311626 BNC2Q6ZN30 1099 aaPredicted RBP25.64■■□□□ 1.69
HOXB3-201ENST00000311626 GK5Q6ZS86 529 aa25.64■■□□□ 1.69
HOXB3-201ENST00000311626 C14orf80Q86SX3 495 aa25.64■■□□□ 1.69
HOXB3-201ENST00000311626 LDB1Q86U70 411 aaPredicted RBP25.64■■□□□ 1.69
HOXB3-201ENST00000311626 POMKQ9H5K3 350 aa25.64■■□□□ 1.69
HOXB3-201ENST00000311626 STK39Q9UEW8 545 aa25.64■■□□□ 1.69
HOXB3-201ENST00000311626 DTNAQ9Y4J8 743 aa25.64■■□□□ 1.69
HOXB3-201ENST00000311626 H2AFYO75367 372 aaKnown RBP25.63■■□□□ 1.69
HOXB3-201ENST00000311626 MT-CO1P00395 513 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 ZNF423Q2M1K9 1284 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 LINC00523Q86TU6 105 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 TMEM86AQ8N2M4 240 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 OR10T2Q8NGX3 314 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 ZCWPW1Q9H0M4 648 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 ZDHHC7Q9NXF8 308 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 PTCH2Q9Y6C5 1203 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 MYLKQ15746 1914 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 TSPAN8P19075 237 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 PDK3Q15120 406 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 PTAR1Q7Z6K3 402 aaPredicted RBP25.63■■□□□ 1.69
HOXB3-201ENST00000311626 PQLC1Q8N2U9 271 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 KDM1BQ8NB78 822 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 BHLHE22Q8NFJ8 381 aaPredicted RBP25.63■■□□□ 1.69
HOXB3-201ENST00000311626 FCRL2Q96LA5 508 aaPredicted RBP25.63■■□□□ 1.69
HOXB3-201ENST00000311626 FSD1LQ9BXM9 530 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 WDR41Q9HAD4 459 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 SLC38A7Q9NVC3 462 aa25.63■■□□□ 1.69
HOXB3-201ENST00000311626 ITGB1P05556 798 aa25.62■■□□□ 1.69
HOXB3-201ENST00000311626 APOA4P06727 396 aa25.62■■□□□ 1.69
HOXB3-201ENST00000311626 MAXP61244 160 aa25.62■■□□□ 1.69
HOXB3-201ENST00000311626 GK3PQ14409 553 aa25.62■■□□□ 1.69
HOXB3-201ENST00000311626 SDHAF4Q5VUM1 108 aa25.62■■□□□ 1.69
HOXB3-201ENST00000311626 PCDH20Q8N6Y1 951 aaKnown RBP25.62■■□□□ 1.69
HOXB3-201ENST00000311626 ICA1LQ8NDH6 482 aa25.62■■□□□ 1.69
HOXB3-201ENST00000311626 PPHLN1Q8NEY8 458 aaKnown RBP25.62■■□□□ 1.69
HOXB3-201ENST00000311626 CASP10Q92851 521 aa25.62■■□□□ 1.69
HOXB3-201ENST00000311626 PARK7Q99497 189 aaKnown RBP25.62■■□□□ 1.69
HOXB3-201ENST00000311626 OSBPL2Q9H1P3 480 aa25.62■■□□□ 1.69
HOXB3-201ENST00000311626 AAR2Q9Y312 384 aaKnown RBP25.62■■□□□ 1.69
HOXB3-201ENST00000311626 OR4Q2P0C623 313 aa25.62■■□□□ 1.69
HOXB3-201ENST00000311626 CPT1AP50416 773 aa25.62■■□□□ 1.69
HOXB3-201ENST00000311626 ART3Q13508 389 aa25.62■■□□□ 1.69
HOXB3-201ENST00000311626 TLR1Q15399 786 aa25.62■■□□□ 1.69
HOXB3-201ENST00000311626 TRAPPC9Q96Q05 1148 aa25.62■■□□□ 1.69
HOXB3-201ENST00000311626 AGO3Q9H9G7 860 aaKnown RBP25.62■■□□□ 1.69
HOXB3-201ENST00000311626 MID2Q9UJV3 735 aa25.62■■□□□ 1.69
HOXB3-201ENST00000311626 TCAF1Q9Y4C2 921 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms