RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 TRAPPC12Q8WVT3 735 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 KATNAL1Q9BW62 490 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 PGAP2Q9UHJ9 254 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 CENPBD1B2RD01 187 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 PRPF4O43172 522 aaKnown RBP eCLIP10.59□□□□□ -0.71
MSRB3-201ENST00000308259 BUD23O43709 281 aaKnown RBP10.59□□□□□ -0.71
MSRB3-201ENST00000308259 TYROBPO43914 113 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 IL32P24001 234 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 ETV3P41162 512 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 PRKAA2P54646 552 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 TNFAIP2Q03169 654 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 C1QBPQ07021 282 aaKnown RBP10.59□□□□□ -0.71
MSRB3-201ENST00000308259 CAPSQ13938 189 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 HNRNPDQ14103 355 aaKnown RBP10.59□□□□□ -0.71
MSRB3-201ENST00000308259 PPP2R5DQ14738 602 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 BCL2A1Q16548 175 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 PTPN20Q4JDL3 420 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 LAYNQ6UX15 382 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 ILDR2Q71H61 639 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 TMEM192Q8IY95 271 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 TMEM174Q8WUU8 243 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 CNPY3Q9BT09 278 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 ZNF696Q9H7X3 374 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 NMRK2Q9NPI5 230 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 HPS4Q9NQG7 708 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 THAP1Q9NVV9 213 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 ADPRHL2Q9NX46 363 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 FAM8A1Q9UBU6 413 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 HMGXB4Q9UGU5 601 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 CNTNAP2Q9UHC6 1331 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 C12orf71A8MTZ7 269 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 FAM25AB3EWG3 89 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 FAM25CB3EWG5 89 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 FAM25GB3EWG6 89 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 TMX2-CTNND1H3BSU7 103 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 ALOX15BO15296 676 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 PFKPQ01813 784 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 XKR3Q5GH77 459 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 IGFN1Q86VF2 1251 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 KCTD6Q8NC69 237 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 CGRRF1Q99675 332 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 ITM2CQ9NQX7 267 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 KANSL3Q9P2N6 904 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 COPG2Q9UBF2 871 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 SUPT20HL2P0C7V6 817 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 MORF4L2Q15014 288 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 POLD3Q15054 466 aaPredicted RBP10.59□□□□□ -0.71
MSRB3-201ENST00000308259 PPP1R3AQ16821 1122 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 FAM214AQ32MH5 1076 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 BSPRYQ5W0U4 402 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 NDUFAF2Q8N183 169 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 PCYOX1LQ8NBM8 494 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 NETO2Q8NC67 525 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 UBA3Q8TBC4 463 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 GRIN3AQ8TCU5 1115 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 SIPA1Q96FS4 1042 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 SERAC1Q96JX3 654 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 PSKH2Q96QS6 385 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 SPATC1LQ9H0A9 340 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 MIR1-1HGQ9H1L0 117 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 GPATCH2LQ9NWQ4 482 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 NR2E3Q9Y5X4 410 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 A0A0B4J269 797 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 B4GALT5O43286 388 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 LRCH4O75427 683 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 ATE1O95260 518 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 TOP3BO95985 862 aaKnown RBP10.58□□□□□ -0.72
MSRB3-201ENST00000308259 PRKCBP05771 671 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 ITGALP20701 1170 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 CYP2B6P20813 491 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 TTKP33981 857 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 IL1RL1Q01638 556 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 DLG2Q15700 870 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 TRIM60Q495X7 471 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 HMBOX1Q6NT76 420 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 C16orf89Q6UX73 402 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 CHST15Q7LFX5 561 aaPredicted RBP10.58□□□□□ -0.72
MSRB3-201ENST00000308259 SLCO6A1Q86UG4 719 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 IFNL1Q8IU54 200 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 CNDP1Q96KN2 507 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 TEPSINQ96N21 525 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 TBCBQ99426 244 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 ZDHHC7Q9NXF8 308 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 KBTBD13C9JR72 458 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 M0QX08 132 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 CA12O43570 354 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 ELK3P41970 407 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 CDC42EP1Q00587 391 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 FAAP100Q0VG06 881 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 MTX3Q5HYI7 312 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 OTOP3Q7RTS5 596 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 GPR180Q86V85 440 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 TMEM35BQ8NCS4 154 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 NPLOC4Q8TAT6 608 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 GPRASP2Q96D09 838 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 EBF4Q9BQW3 602 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 PORCNQ9H237 461 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 R3HDMLQ9H3Y0 253 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 COQ10BQ9H8M1 238 aa10.58□□□□□ -0.72
MSRB3-201ENST00000308259 RNF19AQ9NV58 838 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms