RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 AGKQ53H12 422 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 MAMDC4Q6UXC1 1216 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 PGAM4Q8N0Y7 254 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 CRYBG2Q8N1P7 616 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 KDM1BQ8NB78 822 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 DRAXINQ8NBI3 349 aaPredicted RBP16.8■□□□□ 0.28
SSH3-201ENST00000308127 HMGCLL1Q8TB92 370 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 PPWD1Q96BP3 646 aaKnown RBP16.8■□□□□ 0.28
SSH3-201ENST00000308127 TKTL2Q9H0I9 626 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 EFCAB1Q9HAE3 211 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 PLEKHA5Q9HAU0 1116 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 ATXN10Q9UBB4 475 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 STAP1Q9ULZ2 295 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 PRPF19Q9UMS4 504 aaKnown RBP16.8■□□□□ 0.28
SSH3-201ENST00000308127 FAM95CA0A1B0GW59 222 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 TTC24A2A3L6 582 aaPredicted RBP16.79■□□□□ 0.28
SSH3-201ENST00000308127 FAM149AA5PLN7 773 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 DAB1O75553 588 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 DDHD2O94830 711 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 C1QTNF8P60827 252 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 PSME3P61289 254 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 COG7P83436 770 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 PRKAA1Q13131 559 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 MGAT5BQ3V5L5 792 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 KCTD11Q693B1 232 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 B3GNT6Q6ZMB0 384 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 CPNE9Q8IYJ1 553 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 TMEM102Q8N9M5 508 aaPredicted RBP16.79■□□□□ 0.28
SSH3-201ENST00000308127 HEXDCQ8WVB3 486 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 DUSP16Q9BY84 665 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 GBA3Q9H227 469 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 Q9H521 79 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 NOL11Q9H8H0 719 aaKnown RBP16.79■□□□□ 0.28
SSH3-201ENST00000308127 WDR6Q9NNW5 1121 aaKnown RBP16.79■□□□□ 0.28
SSH3-201ENST00000308127 GTF2IRD1Q9UHL9 959 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 RNF11Q9Y3C5 154 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 PTGDR2Q9Y5Y4 395 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 SDHDO14521 159 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 ACOT8O14734 319 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 TIPRLO75663 272 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 SEC24DO94855 1032 aaPredicted RBP16.79■□□□□ 0.28
SSH3-201ENST00000308127 LRIG2O94898 1065 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 RGS2P41220 211 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 PABPC1LQ4VXU2 614 aaKnown RBP16.79■□□□□ 0.28
SSH3-201ENST00000308127 METTL21CQ5VZV1 264 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 ZNF470Q6ECI4 717 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 SNRNP27Q8WVK2 155 aaKnown RBP16.79■□□□□ 0.28
SSH3-201ENST00000308127 LRCH3Q96II8 777 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 HSFY1Q96LI6 401 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 GPR22Q99680 433 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 FICDQ9BVA6 458 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 OR12D3Q9UGF7 316 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 ACOT9Q9Y305 439 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 ZNF839A8K0R7 811 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 DDNO94850 711 aaPredicted RBP16.79■□□□□ 0.28
SSH3-201ENST00000308127 TNFAIP8O95379 198 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 SLC1A2P43004 574 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 ACADSBP45954 432 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 LILRA4P59901 499 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 FBXO48Q5FWF7 155 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 SH3RF2Q8TEC5 729 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 DNAJB3Q8WWF6 145 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 ISL2Q96A47 359 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 CCDC28BQ9BUN5 200 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 EPS15L1Q9UBC2 864 aa16.79■□□□□ 0.28
SSH3-201ENST00000308127 PRSS51A0A1B0GVH4 220 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 MYBPHLA2RUH7 354 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 PRORSD1PA6NEY8 169 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 TMX2-CTNND1H3BSU7 103 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 TAF6P49848 677 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 YBX1P67809 324 aaKnown RBP16.78■□□□□ 0.28
SSH3-201ENST00000308127 TRIM67Q6ZTA4 783 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 TICAM1Q8IUC6 712 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 LRRC52Q8N7C0 313 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 STYXQ8WUJ0 223 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 LPGAT1Q92604 370 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 CCT7Q99832 543 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 A0A0G2JLL6 359 aaPredicted RBP16.78■□□□□ 0.28
SSH3-201ENST00000308127 SAC3D1A6NKF1 404 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 PIRO00625 290 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 BCAS2O75934 225 aaPredicted RBP16.78■□□□□ 0.28
SSH3-201ENST00000308127 PIM1P11309 404 aaPredicted RBP16.78■□□□□ 0.28
SSH3-201ENST00000308127 PSMC3P17980 439 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 TMED1Q13445 227 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 PRRT2Q7Z6L0 340 aaPredicted RBP16.78■□□□□ 0.28
SSH3-201ENST00000308127 IFNLR1Q8IU57 520 aaPredicted RBP16.78■□□□□ 0.28
SSH3-201ENST00000308127 BRD8Q9H0E9 1235 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 RBM38Q9H0Z9 239 aaKnown RBP16.78■□□□□ 0.28
SSH3-201ENST00000308127 RHOJQ9H4E5 214 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 NDFIP2Q9NV92 336 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 UBQLN1Q9UMX0 589 aaKnown RBP16.78■□□□□ 0.28
SSH3-201ENST00000308127 PCDHGA7Q9Y5G6 932 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 TTC3P53804 2025 aa16.78■□□□□ 0.28
SSH3-201ENST00000308127 WDR90Q96KV7 1748 aa16.77■□□□□ 0.28
SSH3-201ENST00000308127 CABYRO75952 493 aa16.77■□□□□ 0.28
SSH3-201ENST00000308127 CLIC3O95833 236 aa16.77■□□□□ 0.28
SSH3-201ENST00000308127 SLC25A27O95847 323 aa16.77■□□□□ 0.28
SSH3-201ENST00000308127 PPIDQ08752 370 aaKnown RBP16.77■□□□□ 0.28
SSH3-201ENST00000308127 SLC12A1Q13621 1099 aa16.77■□□□□ 0.28
SSH3-201ENST00000308127 PRAMEF19Q5SWL8 479 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms