RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 CDH17Q12864 832 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 CDH18Q13634 790 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 FRG1Q14331 258 aaKnown RBP13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 LEXMQ3ZCV2 418 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 TTMPQ5BVD1 217 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 HP1BP3Q5SSJ5 553 aaPredicted RBP13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 EMC10Q5UCC4 262 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 PARM1Q6UWI2 310 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 TMEM25Q86YD3 366 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 PGBD5Q8N414 524 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 RIBC1Q8N443 379 aaPredicted RBP13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 DCAF4L2Q8NA75 395 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 SPATA22Q8NHS9 363 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 OSCP1Q8WVF1 389 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 FGF14Q92915 247 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 ACDQ96AP0 544 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 ELSPBP1Q96BH3 223 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 FAM83CQ9BQN1 747 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 MGME1Q9BQP7 344 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 MUC3BQ9H195 1237 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 BFARQ9NZS9 450 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 MARK1Q9P0L2 795 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 LGALS13Q9UHV8 139 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 SLC24A2Q9UI40 661 aa13.02□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 C5orf42Q9H799 3197 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 CDH16O75309 829 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 ECI2O75521 394 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 CPP00450 1065 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 EPOP01588 193 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 MMP2P08253 660 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 SSTR1P30872 391 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 SLC20A2Q08357 652 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 NSUN2Q08J23 767 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 HTR4Q13639 388 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 SPARCL1Q14515 664 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 SMAD2Q15796 467 aaKnown RBP13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 KLHL38Q2WGJ6 581 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 EML3Q32P44 896 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 DENND5AQ6IQ26 1287 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 ZNF449Q6P9G9 518 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 MFN1Q8IWA4 741 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 MFSD6LQ8IWD5 586 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 ST13P5Q8NFI4 369 aaPredicted RBP13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 OR52K1Q8NGK4 314 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 UHMK1Q8TAS1 419 aaKnown RBP13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 IRF7Q92985 503 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 TLCD1Q96CP7 247 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 STAMBPL1Q96FJ0 436 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 MRGPRX2Q96LB1 330 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 TBL1YQ9BQ87 522 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 POLR1EQ9GZS1 481 aaKnown RBP13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 STMN4Q9H169 189 aaPredicted RBP13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 PLAC1Q9HBJ0 212 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 SPHK2Q9NRA0 654 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 EURLQ9NYK6 297 aa13.01□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 F5H423 210 aaPredicted RBP13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 ALDH1A2O94788 518 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 CD160O95971 181 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 MT-CYBP00156 380 aaPredicted RBP13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 AGTP01019 485 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 C1QAP02745 245 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 CR2P20023 1033 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 PRKCHP24723 683 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 MZF1P28698 734 aaPredicted RBP13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 STX2P32856 288 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 WNT3AP56704 352 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 GEMIN4P57678 1058 aaKnown RBP13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 ARF5P84085 180 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 SKOR1P84550 965 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 ZNF235Q14590 738 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 CYTH1Q15438 398 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 RALGPS1Q5JS13 557 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 LY6G5CQ5SRR4 150 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 METTL3Q86U44 580 aaKnown RBP13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 CNPY4Q8N129 248 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 WFDC5Q8TCV5 224 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 CYTH2Q99418 400 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 KXD1Q9BQD3 176 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 DHRS4Q9BTZ2 278 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 RPP25Q9BUL9 199 aaKnown RBP13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 C2orf49Q9BVC5 232 aaPredicted RBP13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 SLC2A11Q9BYW1 496 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 IL22Q9GZX6 179 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 DUS2Q9NX74 493 aaKnown RBP13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 MOCS1Q9NZB8 636 aa13□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 LOC285095A0A1B0GVY8 99 aa12.99□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 EXOC1LA0A1B0GW35 172 aa12.99□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 TCRBV9S1A1TA0A576 114 aa12.99□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 C2CD4DB7Z1M9 353 aa12.99□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 CBX4O00257 560 aa12.99□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 RGS16O15492 202 aaPredicted RBP12.99□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 CYP17A1P05093 508 aa12.99□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 PGAM1P18669 254 aa12.99□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 GLDCP23378 1020 aa12.99□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 MGAT1P26572 445 aa12.99□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 GCAP28676 217 aa12.99□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 CSKP41240 450 aa12.99□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 SESN2P58004 480 aaPredicted RBP12.99□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 LONRF1Q17RB8 773 aa12.99□□□□□ -0.33
SHANK2-AS3-201ENST00000307548 TRIM68Q6AZZ1 485 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms