RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 RNF43Q68DV7 783 aa13.34□□□□□ -0.27
SMARCA5-201ENST00000283131 ZCCHC12Q6PEW1 402 aa13.34□□□□□ -0.27
SMARCA5-201ENST00000283131 FAM131AQ6UXB0 335 aa13.34□□□□□ -0.27
SMARCA5-201ENST00000283131 TPCN2Q8NHX9 752 aa13.34□□□□□ -0.27
SMARCA5-201ENST00000283131 PLEKP08567 350 aaPredicted RBP13.33□□□□□ -0.27
SMARCA5-201ENST00000283131 ATXN7L2Q5T6C5 722 aaPredicted RBP13.33□□□□□ -0.27
SMARCA5-201ENST00000283131 TRIM40Q6P9F5 258 aa13.33□□□□□ -0.27
SMARCA5-201ENST00000283131 DEFB128Q7Z7B8 93 aa13.33□□□□□ -0.27
SMARCA5-201ENST00000283131 FAM131BQ86XD5 332 aa13.33□□□□□ -0.27
SMARCA5-201ENST00000283131 TMC8Q8IU68 726 aa13.33□□□□□ -0.27
SMARCA5-201ENST00000283131 TBC1D10CQ8IV04 446 aa13.33□□□□□ -0.27
SMARCA5-201ENST00000283131 C10orf107Q8IVU9 208 aa13.33□□□□□ -0.27
SMARCA5-201ENST00000283131 NELL1Q92832 810 aa13.33□□□□□ -0.27
SMARCA5-201ENST00000283131 MTMR12Q9C0I1 747 aa13.33□□□□□ -0.27
SMARCA5-201ENST00000283131 POMKQ9H5K3 350 aa13.33□□□□□ -0.27
SMARCA5-201ENST00000283131 MFHAS1Q9Y4C4 1052 aa13.33□□□□□ -0.27
SMARCA5-201ENST00000283131 FAM240BA0A1B0GVZ2 78 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 MOXD2PA6NHM9 499 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 BHMG1C9JSJ3 638 aaPredicted RBP13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 SLC28A2O43868 658 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 CYP2F1P24903 491 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 FMO4P31512 558 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 PUS10Q3MIT2 529 aaKnown RBP13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 N4BP2L1Q5TBK1 243 aaPredicted RBP13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 ARHGAP36Q6ZRI8 547 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 ANKS1AQ92625 1134 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 SEMA6AQ9H2E6 1030 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 ZNF224Q9NZL3 707 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 GGA2Q9UJY4 613 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 L7N2F9 121 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 DCKP27707 260 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 NR2C2P49116 596 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 CASP5P51878 434 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 VAMP2P63027 116 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 AP5B1Q2VPB7 878 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 PTCHD4Q6ZW05 846 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 ZZZ3Q8IYH5 903 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 ZNF433Q8N7K0 673 aaPredicted RBP13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 ZNF639Q9UID6 485 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 PALLDQ8WX93 1383 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 H3BUI4 141 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 HMGCRP04035 888 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 SLC6A2P23975 617 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 CDH5P33151 784 aaPredicted RBP13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 RABL6Q3YEC7 729 aaPredicted RBP13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 XRRA1Q6P2D8 792 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 MPP5Q8N3R9 675 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 SRFBP1Q8NEF9 429 aaKnown RBP13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 TMEM121Q9BTD3 319 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 PCDHGC5Q9Y5F6 944 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 HEG1Q9ULI3 1381 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 SH3D21A4FU49 640 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 SLC9A3R1O14745 358 aaPredicted RBP13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 CHST10O43529 356 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 ADAM8P78325 824 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 WASHC2DQ5SRD0 308 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 PIH1D2Q8WWB5 315 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 BTBD10Q9BSF8 475 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 ZDHHC6Q9H6R6 413 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 VCPKMTQ9H867 229 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 PCDHB5Q9Y5E4 795 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 CFAP43Q8NDM7 1665 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 GNALP38405 381 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 NECTIN1Q15223 517 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 GRHL2Q6ISB3 625 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 KLHL35Q6PF15 583 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 PLET1Q6UQ28 207 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 AKAP14Q86UN6 197 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 BRINP2Q9C0B6 783 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 PCDH12Q9NPG4 1184 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 STARD7Q9NQZ5 370 aa13.33□□□□□ -0.28
SMARCA5-201ENST00000283131 CYP11B1P15538 503 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 OLR1P78380 273 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 GPR135Q8IZ08 494 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 CDRT15Q96T59 188 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 PCDHA3Q9Y5H8 950 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 A8MX80 341 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 TFECO14948 347 aaPredicted RBP13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 PTX3P26022 381 aaPredicted RBP13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 LSM3P62310 102 aaKnown RBP13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 NAIF1Q69YI7 327 aaPredicted RBP13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 ZNF470Q6ECI4 717 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 FRRS1Q6ZNA5 592 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 C9P02748 559 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 GP5P40197 560 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 ZNF234Q14588 700 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 GCNT7Q6ZNI0 430 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 SYTL5Q8TDW5 730 aaPredicted RBP13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 C12orf66Q96MD2 445 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 NUP50Q9UKX7 468 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 A0A1W2PQJ5 194 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 DDX3XO00571 662 aaKnown RBP eCLIP13.32□□□□□ -0.287e-9■■■■□ 23
SMARCA5-201ENST00000283131 TKTL1P51854 596 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 MAPKAPK3Q16644 382 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 RNASE12Q5GAN4 147 aaKnown RBP13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 KDM7AQ6ZMT4 941 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 DET1Q7L5Y6 550 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 APBA2Q99767 749 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 CCDC28BQ9BUN5 200 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms