RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 RTP5Q14D33 572 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 KRT31Q15323 416 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 CCDC14Q49A88 953 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 CT47A1Q5JQC4 288 aaPredicted RBP12.98□□□□□ -0.33
CD44-203ENST00000278386 ARTNQ5T4W7 220 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 MANEALQ5VSG8 457 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 TRIM72Q6ZMU5 477 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 LEKR1Q6ZMV7 388 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 ZSCAN30Q86W11 494 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 PARGQ86W56 976 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 DCP2Q8IU60 420 aaKnown RBP12.98□□□□□ -0.33
CD44-203ENST00000278386 CCDC185Q8N715 623 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 DCBLD1Q8N8Z6 715 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 GPT2Q8TD30 523 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 FAM172AQ8WUF8 416 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 RFFLQ8WZ73 363 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 ARHGEF2Q92974 986 aaKnown RBP12.98□□□□□ -0.33
CD44-203ENST00000278386 FEM1CQ96JP0 617 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 SELENOOQ9BVL4 669 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 TMEM248Q9NWD8 314 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 NLGN3Q9NZ94 848 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 GGT7Q9UJ14 662 aa12.98□□□□□ -0.33
CD44-203ENST00000278386 POM121BA6NF01 834 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 NEMP2A6NFY4 417 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 C16orf96A6NNT2 1141 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 FAM72CH0Y354 149 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 FPGTO14772 594 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 RAD51BO15315 384 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 NEBLO76041 1014 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 LRIG2O94898 1065 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 GSRP00390 522 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 CKMT1AP12532 417 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 MYF5P13349 255 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 GPD1P21695 349 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 ADRA1BP35368 520 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 STAT1P42224 750 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 PTPN9P43378 593 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 RABIFP47224 123 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 JAM2P57087 298 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 FGL2Q14314 439 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 ZNF805Q5CZA5 627 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 LRRC73Q5JTD7 316 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 FAM72AQ5TYM5 149 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 FAM72DQ6L9T8 149 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 STRADAQ7RTN6 431 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 NLRP14Q86W24 1093 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 FAM72BQ86X60 149 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 ZNF548Q8NEK5 533 aaPredicted RBP12.97□□□□□ -0.33
CD44-203ENST00000278386 OR2AP1Q8NGE2 309 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 RAB7BQ96AH8 199 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 ISG20Q96AZ6 181 aaKnown RBP12.97□□□□□ -0.33
CD44-203ENST00000278386 IFT43Q96FT9 208 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 BMFQ96LC9 184 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 APOLD1Q96LR9 279 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 BBC3Q96PG8 261 aaPredicted RBP12.97□□□□□ -0.33
CD44-203ENST00000278386 DEPDC7Q96QD5 511 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 DUSP23Q9BVJ7 150 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 MAGEH1Q9H213 219 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 ADAM22Q9P0K1 906 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 NEU3Q9UQ49 428 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 PCDHB1Q9Y5F3 818 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 HS3ST3A1Q9Y663 406 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 LRP4O75096 1905 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 IGSF10Q6WRI0 2623 aa12.97□□□□□ -0.33
CD44-203ENST00000278386 COL27A1Q8IZC6 1860 aaPredicted RBP12.97□□□□□ -0.33
CD44-203ENST00000278386 IGLON5A6NGN9 336 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 K7ESM1 405 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 SCAMP1O15126 338 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 EPHB6O15197 1021 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 TSPAN6O43657 245 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 BUB1O43683 1085 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 TMCC1O94876 653 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 IGSF6O95976 241 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 CALB1P05937 261 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 PLEKP08567 350 aaPredicted RBP12.96□□□□□ -0.33
CD44-203ENST00000278386 KRT3P12035 628 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 NME1P15531 152 aaKnown RBP12.96□□□□□ -0.33
CD44-203ENST00000278386 CHRNB2P17787 502 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 ACTN2P35609 894 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 DUSP3P51452 185 aaPredicted RBP12.96□□□□□ -0.33
CD44-203ENST00000278386 HDAC4P56524 1084 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 CCDC173Q0VFZ6 552 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 FZD2Q14332 565 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 EFHC2Q5JST6 749 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 ATXN7L2Q5T6C5 722 aaPredicted RBP12.96□□□□□ -0.33
CD44-203ENST00000278386 CDKAL1Q5VV42 579 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 DENND6BQ8NEG7 585 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 ANKRD20A12PQ8NF67 263 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 NEK11Q8NG66 645 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 SNIP1Q8TAD8 396 aaKnown RBP12.96□□□□□ -0.33
CD44-203ENST00000278386 ENOX1Q8TC92 643 aaKnown RBP12.96□□□□□ -0.33
CD44-203ENST00000278386 IFI44Q8TCB0 444 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 MAPK15Q8TD08 544 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 NTAN1Q96AB6 310 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 ARHGEF26Q96DR7 871 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 GDAP1L1Q96MZ0 367 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 KLHL32Q96NJ5 620 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 OSBPL1AQ9BXW6 950 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 MAGEB5Q9BZ81 275 aa12.96□□□□□ -0.33
CD44-203ENST00000278386 ABCG4Q9H172 646 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms