RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 CLTCQ00610 1675 aaKnown RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 DCXO43602 365 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 OR7A10O76100 309 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 CCNE2O96020 404 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 ST3GAL1Q11201 340 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 NFE2Q16621 373 aaPredicted RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 YTHDF3Q7Z739 585 aaKnown RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 DPF2Q92785 391 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 PHF12Q96QT6 1004 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 FAM172BPA6NC97 362 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 TYMPP19971 482 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 HMGCS2P54868 508 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 SYT12Q8IV01 421 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 GPALPP1Q8IXQ4 340 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 MTF2Q9Y483 593 aaPredicted RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 LRIG2O94898 1065 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 CTSHP09668 335 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 COX7A2P14406 83 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 MNDAP41218 407 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 MAZP56270 477 aaKnown RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 DHDDSQ86SQ9 333 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 FUKQ8N0W3 1084 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 ENGASEQ8NFI3 743 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 IGDCC4Q8TDY8 1250 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 HDAC7Q8WUI4 952 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 NELL1Q92832 810 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 TBL1YQ9BQ87 522 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 L2HGDHQ9H9P8 463 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 CUEDC1Q9NWM3 386 aaPredicted RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 ANKDD1BA6NHY2 528 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 PLIN3O60664 434 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 RPS6KA4O75676 772 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 TOP3BO95985 862 aaKnown RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 SNRPB2P08579 225 aaKnown RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 DGKAP23743 735 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 ADSLP30566 484 aaPredicted RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 CLK2P49760 499 aaKnown RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 SLC26A2P50443 739 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 LLGL2Q6P1M3 1020 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 KAT5Q92993 513 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 TMEM176AQ96HP8 235 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 POMKQ9H5K3 350 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 AXIN2Q9Y2T1 843 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 USP42Q9H9J4 1324 aaKnown RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 RBAK-RBAKDNI3L0D1 243 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 SLC5A9Q2M3M2 681 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 ZNF512BQ96KM6 892 aaPredicted RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 ERBB3P21860 1342 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 RAMP2O60895 175 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 ZBTB6Q15916 424 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 GLRA4Q5JXX5 417 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 GJD3Q8N144 294 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 GGA3Q9NZ52 723 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 NCKAP1Q9Y2A7 1128 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 CYP27B1O15528 508 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 GNRH1P01148 92 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 URODP06132 367 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 FAM153BP0C7A2 387 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 CRATP43155 626 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 MAGEA12P43365 314 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 ACOX1Q15067 660 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 LCN1P1Q5VSP4 162 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 SPOCD1Q6ZMY3 1216 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 PIGBQ92521 554 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 VAT1Q99536 393 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 FAM196BA6NMK8 535 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 AKAP8O43823 692 aaKnown RBP12.21□□□□□ -0.45
SRRM4-201ENST00000267260 OR1E1P30953 314 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 IST1P53990 364 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 LSM3P62310 102 aaKnown RBP12.21□□□□□ -0.45
SRRM4-201ENST00000267260 CBX3Q13185 183 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 PTPAQ15257 358 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 MPZL3Q6UWV2 235 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 TMC3Q7Z5M5 1100 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 DMGDHQ9UI17 866 aaKnown RBP12.21□□□□□ -0.45
SRRM4-201ENST00000267260 MAGEC1O60732 1142 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 CSH1P0DML2 217 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 CSH2P0DML3 217 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 GRIA3P42263 894 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 BAATQ14032 418 aaPredicted RBP12.21□□□□□ -0.45
SRRM4-201ENST00000267260 TTC7BQ86TV6 843 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 EIF1ADQ8N9N8 165 aaKnown RBP12.21□□□□□ -0.45
SRRM4-201ENST00000267260 CBWD1Q9BRT8 395 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 KANSL3Q9P2N6 904 aa12.21□□□□□ -0.45
SRRM4-201ENST00000267260 CLTCL1P53675 1640 aa12.21□□□□□ -0.46
SRRM4-201ENST00000267260 PPP1R3GB7ZBB8 358 aa12.21□□□□□ -0.46
SRRM4-201ENST00000267260 MATN2O00339 956 aa12.21□□□□□ -0.46
SRRM4-201ENST00000267260 IGSF6O95976 241 aa12.21□□□□□ -0.46
SRRM4-201ENST00000267260 SERPINA3P01011 423 aa12.21□□□□□ -0.46
SRRM4-201ENST00000267260 DPYSQ14117 519 aa12.21□□□□□ -0.46
SRRM4-201ENST00000267260 TRIM40Q6P9F5 258 aa12.21□□□□□ -0.46
SRRM4-201ENST00000267260 FRMD7Q6ZUT3 714 aa12.21□□□□□ -0.46
SRRM4-201ENST00000267260 ILDR2Q71H61 639 aa12.21□□□□□ -0.46
SRRM4-201ENST00000267260 SNX32Q86XE0 403 aa12.21□□□□□ -0.46
SRRM4-201ENST00000267260 ERCC2P18074 760 aa12.21□□□□□ -0.46
SRRM4-201ENST00000267260 MED22Q15528 200 aa12.21□□□□□ -0.46
SRRM4-201ENST00000267260 PSMD5Q16401 504 aa12.21□□□□□ -0.46
SRRM4-201ENST00000267260 SLC45A4Q5BKX6 768 aa12.21□□□□□ -0.46
SRRM4-201ENST00000267260 DEF8Q6ZN54 512 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms