RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 SRSF5Q13243 272 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 NLRP8Q86W28 1048 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 SLC9A7Q96T83 725 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 UBE2OQ9C0C9 1292 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 RXFP3Q9NSD7 469 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 HSFX1Q9UBD0 423 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 PPARGC1AQ9UBK2 798 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 DNALI1O14645 258 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 UPP2O95045 317 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 PDGFRAP16234 1089 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 NOS2P35228 1153 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 CLCN7P51798 805 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 YWHAGP61981 247 aaKnown RBP eCLIP5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 DSC2Q02487 901 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 CCDC38Q502W7 563 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 LRRC73Q5JTD7 316 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 FAM102AQ5T9C2 384 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 ESRP1Q6NXG1 681 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 SERPINA13PQ6UXR4 307 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 RNF180Q86T96 592 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.73□□□□□ -1.493e-8■■■■■ 71.6
TOPBP1-201ENST00000260810 OR4K3Q96R72 315 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 TM7SF3Q9NS93 570 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 PCDHA11Q9Y5I1 949 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 TBKBP1A7MCY6 615 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 A8MXQ7 604 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 TLL1O43897 1013 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 STAMBPO95630 424 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 TWF1Q12792 350 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 CDO1Q16878 200 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 Q6ZS52 159 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 TRABD2AQ86V40 505 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 CMTM8Q8IZV2 173 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 RNF175Q8N4F7 328 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 ZCCHC9Q8N567 271 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 GABPB2Q8TAK5 448 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 GOLGA5Q8TBA6 731 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 HAPLN3Q96S86 360 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 SYBUQ9NX95 663 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 DNAH10Q8IVF4 4471 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 IQCF5A8MTL0 148 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 GPR182O15218 404 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 MYO1EQ12965 1108 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 PDE1CQ14123 709 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 PCLAFQ15004 111 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 KBTBD12Q3ZCT8 623 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 ENOSF1Q7L5Y1 443 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 GPR26Q8NDV2 337 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 FGF13Q92913 245 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 IQCDQ96DY2 449 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 FUBP3Q96I24 572 aaKnown RBP eCLIP5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 TTPALQ9BTX7 342 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 PDCL3Q9H2J4 239 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 CCDC134Q9H6E4 229 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 CAB39LQ9H9S4 337 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 FAT2Q9NYQ8 4349 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 CCDC151A5D8V7 595 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 PABPN1LA6NDY0 278 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 LOC730098B7Z3J9 87 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 TAPBPO15533 448 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 CYP17A1P05093 508 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 CELA2BP08218 269 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 NR0B1P51843 470 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 PLK1P53350 603 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 RING1Q06587 406 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 MFSD14CQ5VZR4 134 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 ADGRD1Q6QNK2 874 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 TECPR1Q7Z6L1 1165 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 RNF135Q8IUD6 432 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 TMEM175Q9BSA9 504 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 ATXN3LQ9H3M9 355 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 CLIC5Q9NZA1 410 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 EVLQ9UI08 416 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 VPS51Q9UID3 782 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 ARL5AQ9Y689 179 aa5.73□□□□□ -1.49
TOPBP1-201ENST00000260810 K7ESF4 209 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 C2CD2LO14523 706 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 ZBTB14O43829 449 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 PEBP1P30086 187 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 DNA2P51530 1060 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 BCAT1P54687 386 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 LMAN2Q12907 356 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 ZNF667Q5HYK9 610 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 DGLUCYQ7Z3D6 616 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 FUNDC1Q8IVP5 155 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 ABI1Q8IZP0 508 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 ADAMTS6Q9UKP5 1117 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 AP4E1Q9UPM8 1137 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 PPM1DO15297 605 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 SH3BP5O60239 455 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 KPNA6O60684 536 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 HEXIM1O94992 359 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 SLU7O95391 586 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 KRT17Q04695 432 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 FAM83HQ6ZRV2 1179 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 CREBRFQ8IUR6 639 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 EIF1ADQ8N9N8 165 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 DDX50Q9BQ39 737 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 ZWILCHQ9H900 591 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 CARS2Q9HA77 564 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms