RNA–Protein interactions for RNA: ENSMUST00000084524.3

Prpf4-201, Transcript of U4/U6 small nuclear ribonucleoprotein Prp4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf4, Length 5,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4-201ENSMUST00000084524 Trim45Q6PFY8 580 aa8.98□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Q8BH50 245 aa8.98□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Guca1bQ8VBV8 201 aa8.98□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Washc1Q8VDD8 475 aa8.98□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Sorcs3Q8VI51 1219 aa8.98□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Traf7Q922B6 594 aa8.98□□□□□ -0.97
Prpf4-201ENSMUST00000084524 4933425L06RikQ9D3Z8 585 aa8.98□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Tmem176aQ9DCS1 244 aa8.98□□□□□ -0.97
Prpf4-201ENSMUST00000084524 IghaA0A0A6YXW6 389 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Gm13119B1ARV5 481 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Gm8257E9Q8R3 264 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 B020004C17RikJ3QP07 232 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Tnk2O54967 1055 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Slurp2P0DP59 97 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Ptpn1P35821 432 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 NfycP70353 335 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Coq7P97478 217 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Eri2Q5BKS4 688 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 CltbQ6IRU5 229 aaKnown RBP8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 CyldQ80TQ2 952 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Hmgxb4Q80Y32 594 aaKnown RBP8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 KyQ8C8H8 661 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Cdc73Q8JZM7 531 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Cybrd1Q925G2 290 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Tex44Q9DA60 530 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Lgr5Q9Z1P4 907 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Itga8A2ARA8 1062 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Mup18A2BIM8 181 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Vmn2r73D3Z7M3 851 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Bub1O08901 1058 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Mup11P04938 181 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Dpep1P31428 410 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Prickle1Q3U5C7 832 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Gm21320Q4FZE8 181 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Abl2Q4JIM5 1182 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Slc10a5Q5PT54 434 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Galnt10Q6P9S7 603 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Ssxb3Q6XAS4 170 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Plekha6Q7TQG1 1173 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 LppQ8BFW7 613 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 GskipQ8BGR8 139 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Gper1Q8BMP4 375 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Ifnl3Q8CGK6 193 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Vmn1r64Q8R2B8 320 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Mgat5Q8R4G6 740 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Dnajc9Q91WN1 259 aaKnown RBP8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Depdc7Q91WS7 511 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Reep3Q99KK1 254 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Slc12a9Q99MR3 914 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Olfr704Q9EPF6 315 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Ighv11-2A0A075B5R8 117 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Esp31A8R0W3 114 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Gm281D3Z1Y0 860 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Grip2G3XA20 1042 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Angpt1O08538 498 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 DcxO88809 366 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Ifrd1P19182 449 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Msh2P43247 935 aaKnown RBP8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Lpcat1Q3TFD2 534 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Krt76Q3UV17 594 aaKnown RBP8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Kcnj11Q61743 390 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Smad3Q8BUN5 425 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Trmt10aQ8C1Z8 328 aaKnown RBP8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Sox30Q8CGW4 782 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 KmoQ91WN4 479 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Pdk3Q922H2 415 aaKnown RBP8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Chaf1bQ9D0N7 572 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Tmed10Q9D1D4 219 aaKnown RBP8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Haus5Q9D786 619 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Efhd2Q9D8Y0 240 aaKnown RBP8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Atg7Q9D906 698 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Slc25a19Q9DAM5 318 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Magel2Q9QZ04 1284 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Sae1Q9R1T2 350 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Atp6v1c1Q9Z1G3 382 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Nrxn3Q6P9K9 1571 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Gm21488A0A087WR99 222 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Gm45208A0A140LJ36 292 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Xlr5aA2BI45 236 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 OmdO35103 423 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Slc16a8O35308 492 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Pik3cdO35904 1043 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Smpd2O70572 419 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Stk16O88697 305 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Mcpt1P11034 246 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Copz1P61924 177 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Larp7Q05CL8 570 aaKnown RBP8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Cntn3Q07409 1028 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 4930502E18RikQ14BQ3 236 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Slc39a14Q75N73 489 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Krr1Q8BGA5 380 aaKnown RBP8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Zbtb46Q8BID6 600 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Q8BL95 290 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Atg14Q8CDJ3 492 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Plbd1Q8VCI0 550 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Pcdhb18Q91Y02 792 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Gprc5bQ923Z0 410 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Efhc2Q9D485 750 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Cdc42ep5Q9Z0X0 150 aa8.97□□□□□ -0.97
Prpf4-201ENSMUST00000084524 Astn1Q61137 1302 aa8.97□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 64.8 ms