RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Msantd1Q8BIL2 278 aa10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Scd3Q99PL7 359 aa10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Cdh9P70407 786 aa10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Vps45P97390 570 aa10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 DtymkP97930 212 aa10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Brms1lQ3U1T3 323 aa10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gpd2Q64521 727 aa10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Nyap1Q6PFX7 833 aa10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Rbm4Q8C7Q4 361 aaKnown RBP10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Colec12Q8K4Q8 742 aa10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Rbm4bQ8VE92 357 aaKnown RBP10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Mtfr1Q99MB2 328 aa10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Rnf135Q9CWS1 417 aa10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gpn3Q9D3W4 284 aa10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Khdrbs3Q9R226 346 aaKnown RBP10.56□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gm13078A2AGW8 474 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Slc6a2O55192 617 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Rb1P13405 921 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Snrpd1P62315 119 aaKnown RBP10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Dph1Q5NCQ5 438 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Mgrn1Q9D074 532 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Trim10Q9WUH5 489 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 PtgisO35074 501 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Pnpla5Q32LZ8 432 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Fscn1Q61553 493 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Pcdhb19Q91Y01 801 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Kremen1Q99N43 473 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gm10406A6NAS4 205 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gm3373A6NAS7 205 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gm3298E9PW80 205 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gm3667K7N757 205 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gm3558Q5FWC9 205 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 PoliQ6R3M4 717 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Arhgef19Q8BWA8 802 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Olfr589Q8VGV8 317 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 DgkgQ91WG7 788 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 NamptQ99KQ4 491 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Panx1Q9JIP4 426 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 TubP50586 505 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Ssx9Q6XAS3 170 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Ldhal6bQ8BVP2 382 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gfm2Q8R2Q4 779 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Olfr1414Q8VGU5 312 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Nmd3Q99L48 503 aaKnown RBP10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Tpgs1Q99MS8 303 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Slc28a3Q9ERH8 703 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gm7145A0A087WS64 360 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Phf11A6H5X4 337 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 D3Z070 196 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gm8374L7N2A9 172 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Trim63Q38HM4 350 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Rexo4Q6PAQ4 432 aaKnown RBP10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Ssxb1Q9CPU1 170 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Clvs1Q9D4C9 354 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Rpl26P61255 145 aaKnown RBP10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Bbs1Q3V3N7 593 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Best3Q6H1V1 669 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Klhl17Q6TDP3 640 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Ubap1Q8BH48 502 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Noc4lQ8BHY2 516 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Slc35a5Q921R7 437 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Glipr1l1Q9DAG6 236 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 AccsA2AIG8 502 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Pkn3Q8K045 878 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Trps1Q925H1 1281 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Elp3Q9CZX0 547 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Pgbd1E9Q492 415 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Mdm4O35618 489 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Ncam1P13595 1115 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Prdx3P20108 257 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 HyiQ8R1F5 277 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Rpp40Q8R1F9 363 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 PigxQ99LV7 254 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 2610042L04RikQ9D073 150 aa10.55□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Zscan5bB2RTN3 468 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Vmn2r100E9QAZ9 850 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Atn1O35126 1175 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Zfp217Q3U0X6 1041 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Aldh16a1Q571I9 802 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Fam171a1A2ATK9 892 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 BhmtO35490 407 aaKnown RBP10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Cyp2j6O54750 501 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 CkmP07310 381 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 SPINDOCQ05AH6 381 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Nell2Q61220 819 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gulp1Q8K2A1 304 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gm6205E9PZS2 359 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gm3033M0QWI0 180 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gm3532M0QWL4 194 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Mtnd3P03899 115 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Clcn3P51791 818 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Q3UE31 404 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Fbxw2Q60584 422 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Crls1Q80ZM8 303 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 TiprlQ8BH58 271 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gm6367Q8C6L9 287 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Dmtf1Q8CE22 761 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Kcnq3Q8K3F6 873 aa10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Sh3kbp1Q8R550 709 aaKnown RBP10.54□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Dcp2Q9CYC6 422 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms