RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Tspan6O70401 245 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 ZfrO88532 1074 aaKnown RBP12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gna15P30678 374 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Nrg2P56974 756 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Arl4aP61213 200 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Snrpd1P62315 119 aaKnown RBP12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Csrp1P97315 193 aaKnown RBP12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Eml1Q05BC3 814 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 IqcmQ149I8 489 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Fbxw18Q3TSA9 469 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gm5935Q497S0 212 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Trim38Q5SZ99 471 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Zbtb17Q60821 794 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Fzd4Q61088 537 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Six4Q61321 775 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Maml1Q6T264 1020 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Cand2Q6ZQ73 1235 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ppm1lQ8BHN0 360 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 4933402J07RikQ8BHX0 270 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Edem2Q8BJT9 577 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Smtnl2Q8CI12 456 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Trip10Q8CJ53 603 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Fermt3Q8K1B8 665 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Dennd1aQ8K382 1016 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Sirt3Q8R104 334 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Hbp1Q8R316 516 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 McmbpQ8R3C0 642 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Pomgnt1Q91X88 660 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Camk1Q91YS8 374 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Fcf1Q9CTH6 198 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Dcp2Q9CYC6 422 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 DynapQ9D7M5 161 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ipo7Q9EPL8 1038 aaKnown RBP12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Tm9sf3Q9ET30 587 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Mpp6Q9JLB0 553 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gm5538W4VSP6 401 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 CenpeQ6RT24 2474 aaKnown RBP12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Chd8Q09XV5 2582 aaKnown RBP12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Prob1A0A087WR45 1010 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gm7792A0A0J9YU01 481 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 IqccA2ADZ8 418 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gm3183D3YUJ6 481 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gm4847G3X946 537 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gm3139J3QK78 481 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gm3106J3QPH3 481 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gm3159K7N760 267 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gucy1b3O54865 620 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Pja1O55176 578 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Mid1O70583 680 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Myo1aO88329 1043 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 ItgavP43406 1044 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ppp2cbP62715 309 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Olfm3P63056 478 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ppp2caP63330 309 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ano9P86044 747 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Meis3P97368 378 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 MlxipQ2VPU4 917 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Togaram2Q3TYG6 1002 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Tnks2Q3UES3 1166 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Pick1Q62083 416 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Syt14Q7TN84 555 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Olfr1057Q7TR75 315 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Fnbp1Q80TY0 616 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Hus1Q8BQY8 280 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Mei4Q8BRM6 389 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Prr33Q8C494 260 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Rnf222Q8CEF8 211 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ipo11Q8K2V6 975 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Lrrc42Q8R2U7 421 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Ndufs1Q91VD9 727 aaKnown RBP12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Arfgap2Q99K28 520 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Mat2bQ99LB6 334 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Cfap57Q9D180 1249 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Fam227bQ9D518 532 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Bace2Q9JL18 514 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Grk1Q9WVL4 564 aa12.31□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Patl2A2ARM1 529 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Srp54bE9PXC0 504 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Srsf11E9Q6E5 511 aaKnown RBP12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Nek2O35942 443 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Cyp2b19O55071 492 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 RngttO55236 597 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Dnajb5O89114 348 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 P01807 119 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 CryaaP24622 196 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Grik2P39087 908 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 HnrnpdQ60668 355 aaKnown RBP12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Asic3Q6X1Y6 530 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Igsf3Q6ZQA6 1194 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Dnajc15Q78YY6 149 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Impg2Q80XH2 1243 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Creb5Q8K1L0 357 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Nup58Q8R332 587 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Med17Q8VCD5 649 aaKnown RBP12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Olfr846Q8VET8 312 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Olfr45Q8VGM1 311 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Spns2Q91VM4 549 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Mapk8Q91Y86 384 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Kdelr1Q99JH8 212 aa12.3□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Nudt8Q9CR24 210 aa12.3□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 46.4 ms