RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Ifi44lQ9BDB7 447 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Cby3Q9CVN6 235 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Zswim7Q9CWQ2 152 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Zfp655Q9CZP3 541 aaKnown RBP10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Tjp3Q9QXY1 905 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Cntnap2Q9CPW0 1332 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Gm43518A0A0G2JGB6 165 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Mageb2A2AHM0 380 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Grin3aA2AIR5 1135 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Kctd17E0CYQ0 296 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Dnase1l3O55070 310 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Magea8O89012 320 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Fgfr1P16092 822 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Il6raP22272 460 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 PrkcdP28867 674 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Slc2a3P32037 493 aaKnown RBP10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Pacs2Q3V3Q7 862 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Cyp2c67Q569X9 491 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Tnfaip2Q61333 691 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Syn2Q64332 586 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Ifit3Q64345 403 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Cyp3a11Q64459 504 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Olfr814Q7TRH4 310 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Mib1Q80SY4 1006 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Pdk1Q8BFP9 434 aaKnown RBP10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 VcpkmtQ8C436 228 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 LzicQ8K3C3 190 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 RorbQ8R1B8 470 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Pcdha11Q91Y19 950 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 TfQ921I1 697 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Ecrg4Q99LS0 148 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Magel2Q9QZ04 1284 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Pkd2l1A2A259 760 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Oog1E9Q5G7 496 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 PigfO09101 219 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 PdgfrbP05622 1098 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Mcpt1P11034 246 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Copz1P61924 177 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Tsc22d1P62500 1077 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Eif2ak2Q03963 515 aaKnown RBP10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Ptgs2Q05769 604 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Hyal4Q05A56 481 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Fnip1Q68FD7 1165 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Abcg2Q7TMS5 657 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Olfr392Q7TRX6 312 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Aldh3b1Q80VQ0 468 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Teddm1aQ810U2 305 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Fbxo44Q8BK26 255 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Fam180aQ8BR21 173 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Palm2Q8BR92 376 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 NpntQ91V88 561 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Ist1Q9CX00 362 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Cpsf3Q9QXK7 684 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Dnajc12Q9R022 198 aa10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Khdrbs3Q9R226 346 aaKnown RBP10.79□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Fibcd1A2AV25 459 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Gbp4A4UUI3 631 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Skint6A7XUZ6 1240 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Sult3a2G5E904 293 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Mknk1O08605 427 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Rgs2O08849 211 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Apex1P28352 317 aaKnown RBP10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Slc6a13P31649 602 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Inpp1P49442 396 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Bop1P97452 732 aaKnown RBP10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 CtscP97821 462 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Ogfod1Q3U0K8 545 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Klrg2Q3UM83 387 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Nr2c1Q505F1 590 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Brip1Q5SXJ3 1174 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Six1Q62231 284 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Nr6a1Q64249 495 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 RadilQ69Z89 1099 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Cxcr1Q810W6 351 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 TiprlQ8BH58 271 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Eme1Q8BJW7 570 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Angel2Q8K1C0 544 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Rnf219Q8K2Y0 722 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Ccdc59Q8R2N0 240 aaKnown RBP10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Rnf144aQ925F3 292 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Acot13Q9CQR4 140 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Serpinb9bQ9DAV6 377 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Leng1Q9DB98 261 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Asap1Q9QWY8 1147 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Psma4Q9R1P0 261 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Nupr1Q9WTK0 80 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Vmn2r125D3Z3M1 369 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 SfnO70456 248 aaKnown RBP10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Krt4P07744 525 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 LtfP08071 707 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 C1qbP14106 253 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Mmp20P57748 482 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Adamts18Q4VC17 1219 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Kiaa1841Q68FF0 718 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 AtminQ6P9S1 818 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Ssxb3Q6XAS4 170 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Catsper4Q8BVN3 442 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 TpbglQ8C013 384 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 NaprtQ8CC86 538 aa10.78□□□□□ -0.68
Rnf40-201ENSMUST00000033088 Hid1Q8R1F6 788 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms