RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Tspan3Q9QY33 253 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Slc11a2P49282 568 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 LbpQ61805 481 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Hbs1lQ69ZS7 682 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Olfr169Q7TS53 313 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Gpr151Q7TSN6 422 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 TrabdQ99JY4 376 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Pkp3Q9QY23 797 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Tmem59Q9QY73 323 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Gm6351K9J7D1 481 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 C1qbP14106 253 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Ptpn11P35235 597 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Pex2P55098 305 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Mtf2Q02395 593 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Zmat1Q3V0C1 714 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Mapre3Q6PER3 281 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Pabpc5Q8C7D3 381 aaKnown RBP16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Mfsd6Q8CBH5 775 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Pcdhga10Q91XY9 930 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Ngly1Q9JI78 651 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Erich1E9PY43 332 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Cyp2a4P15392 494 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Cyp2a5P20852 494 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 RxrgP28705 463 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Phf12Q5SPL2 1003 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Itm2aQ61500 263 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Stmnd1Q6P3A1 279 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Tdpoz3Q717B4 365 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Hspa12bQ9CZJ2 685 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 PignQ9R1S3 931 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Cldn3Q9Z0G9 219 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Rhox6O70238 227 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Dnmt3aO88508 908 aaKnown RBP16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Cd86P42082 309 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Wnt10bP48614 389 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Olfr8Q60892 310 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Gpbp1l1Q6NZP2 473 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Rilpl2Q99LE1 197 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Asb11Q9CQ31 323 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Pik3c2aQ61194 1686 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Rpl36P47964 105 aaKnown RBP16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Gabrb2P63137 512 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Slc17a7Q3TXX4 560 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Dnajc1Q61712 552 aaKnown RBP16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Dis3lQ8C0S1 1053 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Chmp1aQ921W0 196 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Cab39lQ9DB16 337 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Ssr3Q9DCF9 185 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Kifc1Q9QWT9 674 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Kcnq2Q9Z351 759 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Ckmt1P30275 418 aaKnown RBP16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Rpl26P61255 145 aaKnown RBP16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 MylpfP97457 169 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Lrrc14bQ3UJB3 510 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Mup20Q5FW60 181 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Echs1Q8BH95 290 aaKnown RBP16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Mapk8Q91Y86 384 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 AgkQ9ESW4 421 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Plscr1Q9JJ00 328 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Znf207Q9JMD0 495 aaKnown RBP16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Vmn2r38G3UYA8 861 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Vmn2r33K7N705 861 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Vmn2r44L7N2E1 861 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Reps1O54916 795 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 BgnP28653 369 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 P2rx3Q3UR32 397 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Prom2Q3UUY6 835 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Frmd5Q6P5H6 517 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Nipa1Q8BHK1 323 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Nkd1Q99MH6 471 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Tmbim6Q9D2C7 237 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Dpp6Q9Z218 804 aa16.88■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Zfp811A0A0J9YU71 552 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Lta4hP24527 611 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Shmt1P50431 478 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 AftphQ80WT5 931 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Rpp40Q8R1F9 363 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Vmn1r214Q8R279 367 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Atpaf2Q91YY4 289 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Mta3Q924K8 591 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Taf1dQ9D4V4 322 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 1700031M16RikA0A087WSH0 82 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 AmhP27106 555 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Klrg2Q3UM83 387 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Zdhhc24Q6IR37 284 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Cdkn2aipQ8BI72 563 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Trmt13Q8BYH3 481 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Gpr158Q8C419 1200 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Tcaf2Q921K8 919 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Hmgn3Q9DCB1 99 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Fam205a1D3YZF6 1314 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 H2-Eb1P04230 264 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Mup3P04939 184 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 LeprP48356 1162 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Htr4P97288 388 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Mageb5Q14AN0 366 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Trim40Q3UWA4 246 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 CybbQ61093 570 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 ProcrQ64695 242 aa16.87■□□□□ 0.29
Col17a1-201ENSMUST00000026045 B3galnt2Q8BG28 504 aa16.87■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms