RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 ClcnkbQ9WUB6 687 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Igkv5-43A0A0B4J1J2 115 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Galntl6E5D8G1 601 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Dync1i2O88487 612 aaKnown RBP20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Rab6bP61294 208 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Bop1P97452 732 aaKnown RBP20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Afg1lQ3V384 480 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Trim38Q5SZ99 471 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Klra8Q60682 266 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Stx3Q64704 289 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Ip6k2Q80V72 448 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Hdac7Q8C2B3 938 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Rbm12Q8R4X3 992 aaKnown RBP20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Trem2Q99NH8 227 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Rnf186Q9D241 226 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 ArskQ9D2L1 553 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Polr3cQ9D483 533 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Syap1Q9D5V6 365 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Abcb9Q9JJ59 762 aa20.66■□□□□ 0.9
Trim47-201ENSMUST00000021120 Fam209A2APA5 170 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 4931406B18RikA2RSL7 367 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Olfr1022L7MTT3 315 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Bmpr2O35607 1038 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Wnt6P22727 364 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Dynlt1P51807 113 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Rpl26P61255 145 aaKnown RBP20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Serpina6Q06770 397 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Krt80Q0VBK2 452 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Pyroxd1Q3TMV7 498 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Wbp1lQ8BGW2 348 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Tlk1Q8C0V0 766 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Traf3ip2Q8N7N6 555 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Barhl2Q8VIB5 384 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Ophn1Q99J31 802 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Smok3cA0A087WSF2 504 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Fam171a2A2A699 822 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Slc2a4P14142 509 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Glb1P23780 647 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 PrkcqQ02111 707 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Hsdl2Q2TPA8 490 aaKnown RBP20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Ltbp3Q61810 1268 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Arhgef18Q6P9R4 1021 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Tmem169Q8BG50 297 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 SgczQ8BX51 311 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Wdr27Q8C5V5 780 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Fam136aQ9CR98 138 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 RpgrQ9R0X5 1001 aa20.65■□□□□ 0.9
Trim47-201ENSMUST00000021120 Gm4924A0A1B0GR71 966 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Gm15155B1B034 138 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 NoctO35710 429 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Ptpn20O55082 426 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Smpd2O70572 419 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Ppp3ccP48455 513 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Neurog2P70447 263 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Q14AM7 275 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Gm1604bQ3TRG0 118 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Clhc1Q5M6W3 596 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Mettl21cQ8BLU2 248 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Taf10Q8K0H5 218 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Zdhhc7Q91WU6 308 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Tcaf2Q921K8 919 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Ttc30a1Q99J38 664 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Lrrc46Q9DAP0 323 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 PcntP48725 2898 aa20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Baz2aQ91YE5 1889 aaKnown RBP20.64■□□□□ 0.89
Trim47-201ENSMUST00000021120 Gm6685D3YYP3 228 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Pdzd7E9Q9W7 1021 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Gm8444F6XS56 118 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Atxn1lP0C7T6 687 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Fdft1P53798 416 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 PolgP54099 1218 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 McuQ3UMR5 350 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Mthfd1lQ3V3R1 977 aaKnown RBP20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 DcstampQ7TNJ0 470 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Got1l1Q7TSV6 404 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Gabbr2Q80T41 940 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 DrgxQ8BYH0 263 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 PigwQ8C398 503 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 PmpcbQ9CXT8 489 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Kif12Q9D2Z8 642 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 PgcQ9D7R7 392 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Tspan17Q9D7W4 270 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Ccdc103Q9D9P2 237 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Tmbim4Q9DA39 238 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Chmp2aQ9DB34 222 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Clec1bQ9JL99 229 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Msh5Q9QUM7 833 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Tmem59Q9QY73 323 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Vwa8Q8CC88 1905 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Axin1O35625 863 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Hmga1P17095 107 aaKnown RBP20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Ntrk1Q3UFB7 799 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Cd6Q61003 665 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Armc12Q80X86 340 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Q8CIL4 281 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Klhl2Q8JZP3 593 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Lmcd1Q8VEE1 365 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Tas1r2Q925I4 843 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Med21Q9CQ39 144 aa20.63■□□□□ 0.89
Trim47-201ENSMUST00000021120 Wars2Q9CYK1 360 aa20.63■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms