RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 C16orf89Q6UX73 402 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 CNTD1Q8N815 330 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 SMOQ99835 787 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 FAM192AQ9GZU8 254 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 IL22Q9GZX6 179 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 CASS4Q9NQ75 786 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 FAM95CA0A1B0GW59 222 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 MSI1O43347 362 aaKnown RBP14.8□□□□□ -0.04
SCARB2-221ENST00000640341 SPATA31D3P0C874 917 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 SLC35E2BP0CK96 405 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 BDNFP23560 247 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 PPARGP37231 505 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-221ENST00000640341 DPP6P42658 865 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 DAOAP59103 153 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 PPIL2Q13356 520 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 NAPEPLDQ6IQ20 393 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 SPATA31D4Q6ZUB0 917 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 PPWD1Q96BP3 646 aaKnown RBP14.8□□□□□ -0.04
SCARB2-221ENST00000640341 POMKQ9H5K3 350 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 STK39Q9UEW8 545 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 DERAQ9Y315 318 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 AP4B1Q9Y6B7 739 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 SHROOM3Q8TF72 1996 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 NRCAMQ92823 1304 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 TTC24A2A3L6 582 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-221ENST00000640341 C9JVG2 144 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 STMN1P16949 149 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 PNPLA4P41247 253 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 CLCNKBP51801 687 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 PPIDQ08752 370 aaKnown RBP14.8□□□□□ -0.04
SCARB2-221ENST00000640341 PTK2BQ14289 1009 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 LRRC8EQ6NSJ5 796 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 FAM35AQ86V20 835 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 APLFQ8IW19 511 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-221ENST00000640341 ADAM28Q9UKQ2 775 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 PSMD13Q9UNM6 376 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 PAPPA2Q9BXP8 1791 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 GRID2O43424 1007 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 CLPTM1O96005 669 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 SNAPC2Q13487 334 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 DBN1Q16643 649 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 DUSP28Q4G0W2 176 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 PITRM1Q5JRX3 1037 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 ATP6V1E2Q96A05 226 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 EME1Q96AY2 570 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 PKP2Q99959 881 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 TRPC7Q9HCX4 862 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 SFMBT1Q9UHJ3 866 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 FBXW11Q9UKB1 542 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 COPG1Q9Y678 874 aaKnown RBP14.79□□□□□ -0.04
SCARB2-221ENST00000640341 SLC4A7Q9Y6M7 1214 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 ZNF638Q14966 1978 aaKnown RBP14.79□□□□□ -0.04
SCARB2-221ENST00000640341 DNAJA2O60884 412 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 GLDCP23378 1020 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 TAS2R39P59534 338 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 PRKAA1Q13131 559 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 SLC12A1Q13621 1099 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 PPP1R3AQ16821 1122 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 MAP3K21Q5TCX8 1036 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 ALKAL1Q6UXT8 129 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 CENPLQ8N0S6 344 aaPredicted RBP14.79□□□□□ -0.04
SCARB2-221ENST00000640341 ATPAF2Q8N5M1 289 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 SCAMP5Q8TAC9 235 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 TEKT5Q96M29 485 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 SLC39A3Q9BRY0 314 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 DRC3Q9H069 523 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 TSPYL2Q9H2G4 693 aaPredicted RBP14.79□□□□□ -0.04
SCARB2-221ENST00000640341 UBAP1Q9NZ09 502 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 MPP6Q9NZW5 540 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 LZTS1Q9Y250 596 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 GPC4O75487 556 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 SBK3P0C264 359 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 ALOX15P16050 662 aaPredicted RBP14.79□□□□□ -0.04
SCARB2-221ENST00000640341 CXCR3P49682 368 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 MAXP61244 160 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 PDAP1Q13442 181 aaKnown RBP14.79□□□□□ -0.04
SCARB2-221ENST00000640341 ZYG11AQ6WRX3 759 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 RBM44Q6ZP01 1051 aaKnown RBP14.79□□□□□ -0.04
SCARB2-221ENST00000640341 MPP4Q96JB8 637 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 EFCAB1Q9HAE3 211 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 GDAP2Q9NXN4 497 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 GNEQ9Y223 722 aaKnown RBP14.79□□□□□ -0.04
SCARB2-221ENST00000640341 CLEC11AQ9Y240 323 aa14.79□□□□□ -0.04
SCARB2-221ENST00000640341 TMEM114B3SHH9 223 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 CRTAMO95727 393 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 PGK1P00558 417 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 SLC4A1P02730 911 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 ME2P23368 584 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 SLC5A9Q2M3M2 681 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 TAC4Q86UU9 113 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 LILRA2Q8N149 483 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 TRPV6Q9H1D0 765 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 RHOJQ9H4E5 214 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 VCX3AQ9NNX9 186 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 NDFIP2Q9NV92 336 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 PTGESO14684 152 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 SLC1A2P43004 574 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 AGKQ53H12 422 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 ZNF789Q5FWF6 425 aa14.78□□□□□ -0.04
SCARB2-221ENST00000640341 RBM20Q5T481 1227 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms