RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 PTPN9P43378 593 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 CDH4P55283 916 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 TJAP1Q5JTD0 557 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 SDHAF4Q5VUM1 108 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 ALLCQ8N6M5 410 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 B4GALNT2Q8NHY0 566 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 LNX1Q8TBB1 728 aaPredicted RBP11.15□□□□□ -0.62
SCN1B-208ENST00000640135 PHF21BQ96EK2 531 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 SLC9A7Q96T83 725 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 MAGEH1Q9H213 219 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 MID1IP1Q9NPA3 183 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 GMIPQ9P107 970 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 COL1A1P02452 1464 aaPredicted RBP11.15□□□□□ -0.62
SCN1B-208ENST00000640135 DUOX1Q9NRD9 1551 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 LRRC72A6NJI9 287 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 ACSL4O60488 711 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 GJB6O95452 261 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 ALBP02768 609 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 GOT1P17174 413 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 NUMBP49757 651 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 CLCNKBP51801 687 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 HSPA14Q0VDF9 509 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 DAB2IPQ5VWQ8 1189 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 CYP20A1Q6UW02 462 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 BNC2Q6ZN30 1099 aaPredicted RBP11.15□□□□□ -0.62
SCN1B-208ENST00000640135 RASAL3Q86YV0 1011 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 CERS2Q96G23 380 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 INTS7Q9NVH2 962 aaKnown RBP11.15□□□□□ -0.62
SCN1B-208ENST00000640135 SFMBT1Q9UHJ3 866 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 HS6ST1O60243 411 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 ASLP04424 464 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 C8AP07357 584 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 NTSP30990 170 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 ALDH9A1P49189 494 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 AQP5P55064 265 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 OR52K1Q8NGK4 314 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 TRMT13Q9NUP7 481 aaKnown RBP11.15□□□□□ -0.62
SCN1B-208ENST00000640135 SOHLH2Q9NX45 425 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 NINJ2Q9NZG7 142 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 GPSM3Q9Y4H4 160 aa11.15□□□□□ -0.62
SCN1B-208ENST00000640135 H3BQF6 201 aa11.15□□□□□ -0.63
SCN1B-208ENST00000640135 SEC22BO75396 215 aa11.15□□□□□ -0.63
SCN1B-208ENST00000640135 C1RP00736 705 aa11.15□□□□□ -0.63
SCN1B-208ENST00000640135 PABPC1P11940 636 aaKnown RBP11.15□□□□□ -0.63
SCN1B-208ENST00000640135 DDX6P26196 483 aaKnown RBP eCLIP11.15□□□□□ -0.63
SCN1B-208ENST00000640135 BHLHB9Q6PI77 547 aa11.15□□□□□ -0.63
SCN1B-208ENST00000640135 TXNDC11Q6PKC3 985 aa11.15□□□□□ -0.63
SCN1B-208ENST00000640135 SLC22A17Q8WUG5 538 aa11.15□□□□□ -0.63
SCN1B-208ENST00000640135 PTCD2Q8WV60 388 aaKnown RBP11.15□□□□□ -0.63
SCN1B-208ENST00000640135 MYO19Q96H55 970 aa11.15□□□□□ -0.63
SCN1B-208ENST00000640135 HGH1Q9BTY7 390 aa11.15□□□□□ -0.63
SCN1B-208ENST00000640135 SHCBP1LQ9BZQ2 653 aa11.15□□□□□ -0.63
SCN1B-208ENST00000640135 POLMQ9NP87 494 aaPredicted RBP11.15□□□□□ -0.63
SCN1B-208ENST00000640135 CHST7Q9NS84 486 aa11.15□□□□□ -0.63
SCN1B-208ENST00000640135 L1RE1Q9UN81 338 aa11.15□□□□□ -0.63
SCN1B-208ENST00000640135 TBC1D3DA0A087WVF3 549 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 TBC1D3IA0A087WXS9 549 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 TBC1D3EA0A087X179 549 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 TBC1D3KA0A087X1G2 549 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 PIPSLA2A3N6 862 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 TBC1D3FA6NER0 549 aaPredicted RBP11.14□□□□□ -0.63
SCN1B-208ENST00000640135 C5orf60A6NFR6 353 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 TBC1D3LB9A6J9 549 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 CCL16O15467 120 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 RASSF9O75901 435 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 DGKIO75912 1065 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 TBC1D3HP0C7X1 549 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 TACR2P21452 398 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 CALB2P22676 271 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 ERVK-21P61565 698 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 GPM6BQ13491 265 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 ARHGAP17Q68EM7 881 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 TBC1D3GQ6DHY5 549 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 TBC1D3CQ6IPX1 549 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 PLEKHA7Q6IQ23 1121 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 CHMP1BQ7LBR1 199 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 SLC44A2Q8IWA5 706 aaPredicted RBP11.14□□□□□ -0.63
SCN1B-208ENST00000640135 TBC1D3Q8IZP1 549 aaPredicted RBP11.14□□□□□ -0.63
SCN1B-208ENST00000640135 FNDC5Q8NAU1 212 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 GOLGA2P5Q9HBQ8 144 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 ZNHIT2Q9UHR6 403 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 ZMYND8Q9ULU4 1186 aaPredicted RBP11.14□□□□□ -0.63
SCN1B-208ENST00000640135 LRRC37A3O60309 1634 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 FSCN2O14926 492 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 ATP6V1C1P21283 382 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 SSTR1P30872 391 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 ABL2P42684 1182 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 TRIP10Q15642 601 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 FAM187BQ17R55 369 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 CERS6Q6ZMG9 384 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 TMC3Q7Z5M5 1100 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 SRLQ86TD4 932 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 ARNTL2Q8WYA1 636 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 SAMD11Q96NU1 681 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 FANCEQ9HB96 536 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 DUS2Q9NX74 493 aaKnown RBP11.14□□□□□ -0.63
SCN1B-208ENST00000640135 PCDHB9Q9Y5E1 797 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 KCNE2Q9Y6J6 123 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 LTBP4Q8N2S1 1624 aa11.14□□□□□ -0.63
SCN1B-208ENST00000640135 PIGRP01833 764 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms