RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 A0A1W2PPC1 479 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 COPEO14579 308 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 LCA5LO95447 670 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 UGT2B4P06133 528 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 GRIA2P42262 883 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 CARSP49589 748 aaKnown RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 ZC3H12AQ5D1E8 599 aaKnown RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 PPP1R15BQ5SWA1 713 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 PAGE2Q7Z2X7 111 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 SLC22A18Q96BI1 424 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 C5orf34Q96MH7 638 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 TMEM245Q9H330 911 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 VPS45Q9NRW7 570 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 VTI1BQ9UEU0 232 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 TTC7AQ9ULT0 858 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 MAFFQ9ULX9 164 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 XRN1Q8IZH2 1706 aaKnown RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 CDK14O94921 469 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 MAPK1P28482 360 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 TKTP29401 623 aaKnown RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 IL2P60568 153 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 ZMYND11Q15326 602 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 KLHL38Q2WGJ6 581 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 BRMS1LQ5PSV4 323 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 RXFP2Q8WXD0 754 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 TMEM74Q96NL1 305 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 WRAP53Q9BUR4 548 aaKnown RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 FAIM2Q9BWQ8 316 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 SEMA4AQ9H3S1 761 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 ACTR8Q9H981 624 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 TBC1D17Q9HA65 648 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 RIC8BQ9NVN3 520 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 GMIPQ9P107 970 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 BLOC1S6Q9UL45 172 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 RNF112Q9ULX5 631 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 INSL5Q9Y5Q6 135 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 C16orf96A6NNT2 1141 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 TMEM150CB9EJG8 249 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 H0Y3Z8 333 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 DUX1O43812 170 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 ITGBL1O95965 494 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 GLRA2P23416 452 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 CMPK1P30085 196 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 NUDT1P36639 197 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 NDUFA5Q16718 116 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 KBTBD12Q3ZCT8 623 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 ARHGEF19Q8IW93 802 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 KLHL6Q8WZ60 621 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 TMEM121Q9BTD3 319 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 NAT9Q9BTE0 207 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 RUSC1Q9BVN2 902 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 TUBB1Q9H4B7 451 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 CAAP1Q9H8G2 361 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 FAM227AF5H4B4 570 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 FESP07332 822 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 SPRP35270 261 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 NEK3P51956 506 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 MRPS22P82650 360 aaKnown RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 ECT2LQ008S8 904 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 IL9RQ01113 521 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 SLC44A4Q53GD3 710 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 C6orf10Q5SRN2 563 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 PIK3R6Q5UE93 754 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 ZNF720Q7Z2F6 126 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 SLC9B2Q86UD5 537 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 PIM3Q86V86 326 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 CRLF3Q8IUI8 442 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 SIDT2Q8NBJ9 832 aaKnown RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 ADAM32Q8TC27 787 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 WNT8BQ93098 351 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 ATXN7L3BQ96GX2 97 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 LMLNQ96KR4 655 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 SPATA9Q9BWV2 254 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 AGPAT4Q9NRZ5 378 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 ACOT7O00154 380 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 RAD51BO15315 384 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 MED24O75448 989 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 PON2Q15165 354 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 ERMARDQ5T6L9 678 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 HECTD2Q5U5R9 776 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 AGAP9Q5VTM2 703 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 RAB43Q86YS6 212 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 RUBCNQ92622 972 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 AP2M1Q96CW1 435 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 FAM83CQ9BQN1 747 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 PRKD2Q9BZL6 878 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 CARS2Q9HA77 564 aaKnown RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 COMMD8Q9NX08 183 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 ARHGEF28Q8N1W1 1705 aaKnown RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 SLC37A4O43826 429 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 FAM107AO95990 144 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 CHI3L1P36222 383 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 CCT8P50990 548 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 SIM1P81133 766 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 BMPR2Q13873 1038 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 TOB2Q14106 344 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 MLF2Q15773 248 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 LRRC26Q2I0M4 334 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 FBXO38Q6PIJ6 1188 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms